Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01431

Experiment: NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
1,493,103	+				-0.9
1,493,103	+				-1.4
1,493,103	+				-1.2
1,493,104	-				-0.9
1,493,104	-				-1.2
1,493,139	+				+1.1
1,493,140	-				-0.4
1,493,824	+				+0.7
1,493,824	+				-0.7
1,493,824	+				+0.5
1,493,825	-				-0.2
1,493,825	-				+1.4
1,493,825	-				-0.5
1,493,869	+				+1.1
1,493,923	-				+1.1
1,493,966	+				-0.2
1,493,966	+				+0.5
1,493,966	+				-0.6
1,493,966	+				-0.2
1,493,966	+				+0.8
1,493,966	+				-0.8
1,493,966	+				+1.0
1,493,966	+				-0.0
1,493,966	+				+0.3
1,493,966	+				+0.2
1,493,966	+				+0.5
1,493,966	+				+3.0
1,493,966	+				-1.4
1,493,966	+				-0.5
1,493,966	+				+0.3
1,493,966	+				+0.8
1,493,966	+				-0.2
1,493,966	+				-0.9
1,493,966	+				-0.4
1,493,966	+				-1.5
1,493,966	+				-0.1
1,493,967	-				-1.1
1,493,967	-				+0.8
1,493,967	-				+0.4
1,493,967	-				-1.4
1,493,967	-				+0.3
1,493,967	-				-0.8
1,493,967	-				+0.8
1,493,967	-				+0.8
1,493,967	-				+0.4
1,493,967	-				-0.0
1,493,967	-				-0.6
1,493,967	-				-2.9
1,493,967	-				+1.2
1,493,967	-				-0.4
1,493,967	-				-0.8
1,493,967	-				-0.4
1,493,967	-				-0.6
1,493,967	-				-1.5
1,493,967	-				-1.3
1,493,967	-				+2.1
1,493,967	-				-0.3
1,493,991	+				-1.8
1,493,992	-				-0.9
1,494,228	+		MPMX19_01431	0.15	-0.9
1,494,228	+		MPMX19_01431	0.15	+0.8
1,494,228	+		MPMX19_01431	0.15	-0.4
1,494,228	+		MPMX19_01431	0.15	+0.9
1,494,228	+		MPMX19_01431	0.15	-0.2
1,494,228	+		MPMX19_01431	0.15	+1.6
1,494,228	+		MPMX19_01431	0.15	-2.2
1,494,228	+		MPMX19_01431	0.15	-0.0
1,494,229	-		MPMX19_01431	0.15	+0.2
1,494,229	-		MPMX19_01431	0.15	+1.3
1,494,229	-		MPMX19_01431	0.15	-1.3
1,494,229	-		MPMX19_01431	0.15	-2.3
1,494,367	+		MPMX19_01431	0.28	-0.2
1,494,367	+		MPMX19_01431	0.28	+0.7
1,494,367	+		MPMX19_01431	0.28	-3.0
1,494,368	-		MPMX19_01431	0.28	-0.1
1,494,368	-		MPMX19_01431	0.28	+0.4
1,494,368	-		MPMX19_01431	0.28	-0.4
1,494,368	-		MPMX19_01431	0.28	-0.7
1,494,368	-		MPMX19_01431	0.28	+0.5
1,494,936	+		MPMX19_01431	0.80	-1.2
1,494,936	+		MPMX19_01431	0.80	+0.9
1,494,936	+		MPMX19_01431	0.80	-0.6
1,494,936	+		MPMX19_01431	0.80	-0.4
1,494,936	+		MPMX19_01431	0.80	-0.7
1,494,936	+		MPMX19_01431	0.80	-0.0
1,494,936	+		MPMX19_01431	0.80	-0.1
1,494,936	+		MPMX19_01431	0.80	+0.8
1,494,936	+		MPMX19_01431	0.80	+0.3
1,494,936	+		MPMX19_01431	0.80	-1.1
1,494,937	-		MPMX19_01431	0.80	-0.1
1,494,937	-		MPMX19_01431	0.80	-1.5
1,494,937	-		MPMX19_01431	0.80	+0.4
1,494,937	-		MPMX19_01431	0.80	-0.9
1,494,937	-		MPMX19_01431	0.80	-0.0
1,494,937	-		MPMX19_01431	0.80	+0.5
1,494,937	-		MPMX19_01431	0.80	-0.5
1,494,937	-		MPMX19_01431	0.80	+0.6
1,494,937	-		MPMX19_01431	0.80	-1.0
1,494,937	-		MPMX19_01431	0.80	-0.1
1,494,937	-		MPMX19_01431	0.80	-2.6
1,494,937	-		MPMX19_01431	0.80	-1.4
1,494,937	-		MPMX19_01431	0.80	-1.7
1,494,937	-		MPMX19_01431	0.80	+1.6
1,494,937	-		MPMX19_01431	0.80	-0.2
1,494,937	-		MPMX19_01431	0.80	-0.4
1,494,937	-		MPMX19_01431	0.80	+0.1
1,494,960	-		MPMX19_01431	0.82	+1.1
1,495,161	-				-0.5
1,495,161	-				+0.1
1,495,227	+				-0.8
1,495,227	+				-0.7
1,495,228	-				+0.3
1,495,305	+				+0.5
1,495,305	+				+0.1
1,495,305	+				-1.8
1,495,306	-				-1.7
1,495,307	+				+0.3
1,495,308	-				-1.1
1,495,441	+				-0.4
1,495,441	+				-0.4
1,495,442	-				+0.4
1,495,442	-				-0.8
1,495,442	-				-0.4
1,495,442	-				-0.2
1,495,442	-				-0.6
1,495,442	-				-0.7
1,495,442	-				-1.2
1,495,442	-				-0.9
1,495,442	-				+0.4
1,495,465	+				+1.4
1,495,465	+				-0.0
1,495,465	+				+0.2
1,495,465	+				-0.7
1,495,465	+				-0.6
1,495,465	+				+1.1
1,495,465	+				+0.4
1,495,465	+				-0.3
1,495,466	-				+1.6
1,495,466	-				-0.7
1,495,466	-				-0.1
1,495,466	-				-0.9
1,495,720	+				-0.2
1,495,720	+				+0.2
1,495,720	+				+1.1
1,495,720	+				+0.3
1,495,720	+				+1.3
1,495,720	+				-0.7
1,495,721	-				-0.9
1,495,721	-				+0.6
1,495,721	-				-2.1
1,495,721	-				-0.6
1,495,721	-				-1.4
1,495,721	-				-1.1
1,495,721	-				-0.4
1,495,721	-				+0.2
1,495,744	+				+0.9
1,495,894	+		MPMX19_01432	0.14	+0.3
1,495,894	+		MPMX19_01432	0.14	-2.3
1,495,894	+		MPMX19_01432	0.14	-1.2
1,495,894	+		MPMX19_01432	0.14	-1.2
1,495,894	+		MPMX19_01432	0.14	-0.8
1,495,894	+		MPMX19_01432	0.14	-1.1
1,495,894	+		MPMX19_01432	0.14	+1.2
1,495,894	+		MPMX19_01432	0.14	-0.5
1,495,894	+		MPMX19_01432	0.14	-0.5
1,495,894	+		MPMX19_01432	0.14	-0.6
1,495,894	+		MPMX19_01432	0.14	+0.5
1,495,894	+		MPMX19_01432	0.14	+0.6
1,495,894	+		MPMX19_01432	0.14	-1.4
1,495,894	+		MPMX19_01432	0.14	-1.1
1,495,894	+		MPMX19_01432	0.14	+0.8
1,495,894	+		MPMX19_01432	0.14	-1.1
1,495,894	+		MPMX19_01432	0.14	-0.4
1,495,894	+		MPMX19_01432	0.14	-0.2
1,495,894	+		MPMX19_01432	0.14	+1.1
1,495,894	+		MPMX19_01432	0.14	-0.1
1,495,894	+		MPMX19_01432	0.14	+0.6
1,495,894	+		MPMX19_01432	0.14	-1.2
1,495,894	+		MPMX19_01432	0.14	-1.9
1,495,894	+		MPMX19_01432	0.14	-1.2
1,495,894	+		MPMX19_01432	0.14	+0.5
1,495,894	+		MPMX19_01432	0.14	+0.4
1,495,894	+		MPMX19_01432	0.14	-1.9
1,495,894	+		MPMX19_01432	0.14	-0.3
1,495,894	+		MPMX19_01432	0.14	-0.7
1,495,895	-		MPMX19_01432	0.14	+0.1
1,495,895	-		MPMX19_01432	0.14	+0.3
1,495,895	-		MPMX19_01432	0.14	-1.2
1,495,895	-		MPMX19_01432	0.14	-0.2
1,495,895	-		MPMX19_01432	0.14	-0.4
1,495,895	-		MPMX19_01432	0.14	+0.5
1,495,895	-		MPMX19_01432	0.14	-0.2
1,495,895	-		MPMX19_01432	0.14	-0.1
1,495,895	-		MPMX19_01432	0.14	-1.7
1,495,895	-		MPMX19_01432	0.14	-0.4
1,495,895	-		MPMX19_01432	0.14	-1.7
1,495,895	-		MPMX19_01432	0.14	-0.3
1,495,895	-		MPMX19_01432	0.14	-0.1
1,495,895	-		MPMX19_01432	0.14	+0.2
1,495,895	-		MPMX19_01432	0.14	-1.2
1,495,895	-		MPMX19_01432	0.14	+0.7
1,495,895	-		MPMX19_01432	0.14	-2.2
1,495,895	-		MPMX19_01432	0.14	+0.6
1,495,895	-		MPMX19_01432	0.14	-0.8
1,495,895	-		MPMX19_01432	0.14	-0.4
1,495,895	-		MPMX19_01432	0.14	-0.0
1,495,895	-		MPMX19_01432	0.14	-0.9
1,495,895	-		MPMX19_01432	0.14	+2.6
1,495,895	-		MPMX19_01432	0.14	-0.8
1,495,895	-		MPMX19_01432	0.14	+0.3
1,495,895	-		MPMX19_01432	0.14	-0.7
1,495,895	-		MPMX19_01432	0.14	+0.1
1,495,895	-		MPMX19_01432	0.14	+0.3
1,495,951	+		MPMX19_01432	0.15	-0.0
1,495,951	+		MPMX19_01432	0.15	-0.6
1,495,952	-		MPMX19_01432	0.15	-0.6
1,496,044	+		MPMX19_01432	0.18	-0.7
1,496,044	+		MPMX19_01432	0.18	-1.2
1,496,044	+		MPMX19_01432	0.18	+0.6
1,496,044	+		MPMX19_01432	0.18	-0.1
1,496,044	+		MPMX19_01432	0.18	-1.1
1,496,044	+		MPMX19_01432	0.18	+0.2
1,496,044	+		MPMX19_01432	0.18	-0.8
1,496,044	+		MPMX19_01432	0.18	-0.3
1,496,045	-		MPMX19_01432	0.18	+0.9
1,496,045	-		MPMX19_01432	0.18	+0.2
1,496,045	-		MPMX19_01432	0.18	-0.7
1,496,045	-		MPMX19_01432	0.18	+0.8
1,496,045	-		MPMX19_01432	0.18	-0.4
1,496,045	-		MPMX19_01432	0.18	-0.1
1,496,045	-		MPMX19_01432	0.18	-0.1
1,496,045	-		MPMX19_01432	0.18	+1.1
1,496,045	-		MPMX19_01432	0.18	-0.5
1,496,146	+		MPMX19_01432	0.21	+0.2
1,496,147	-		MPMX19_01432	0.21	+0.1