Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_00706

Experiment: NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_00705 and MPMX19_00706 overlap by 1 nucleotidesMPMX19_00706 and MPMX19_00707 are separated by 82 nucleotides MPMX19_00705: MPMX19_00705 - Cell division coordinator CpoB, at 725,895 to 726,749 _00705 MPMX19_00706: MPMX19_00706 - tRNA(Ile)-lysidine synthase, at 726,749 to 728,104 _00706 MPMX19_00707: MPMX19_00707 - ATP-dependent zinc metalloprotease FtsH, at 728,187 to 730,124 _00707 Position (kb) 726 727 728 729Strain fitness (log2 ratio) -2 -1 0 1at 725.806 kb on + strandat 725.806 kb on + strandat 725.807 kb on - strandat 725.831 kb on + strandat 725.831 kb on + strandat 725.888 kb on + strandat 725.888 kb on + strandat 725.888 kb on + strandat 726.414 kb on + strand, within MPMX19_00705at 726.414 kb on + strand, within MPMX19_00705at 726.414 kb on + strand, within MPMX19_00705at 726.507 kb on + strand, within MPMX19_00705at 726.507 kb on + strand, within MPMX19_00705at 726.507 kb on + strand, within MPMX19_00705at 726.507 kb on + strand, within MPMX19_00705at 726.507 kb on + strand, within MPMX19_00705at 726.507 kb on + strand, within MPMX19_00705at 726.507 kb on + strand, within MPMX19_00705at 726.507 kb on + strand, within MPMX19_00705at 726.507 kb on + strand, within MPMX19_00705at 726.510 kb on + strand, within MPMX19_00705at 726.510 kb on + strand, within MPMX19_00705at 726.510 kb on + strand, within MPMX19_00705at 726.510 kb on + strand, within MPMX19_00705at 726.510 kb on + strand, within MPMX19_00705at 726.510 kb on + strand, within MPMX19_00705at 726.510 kb on + strand, within MPMX19_00705at 726.510 kb on + strand, within MPMX19_00705at 728.071 kb on + strandat 728.071 kb on + strandat 728.098 kb on + strandat 728.098 kb on + strandat 728.098 kb on + strandat 728.098 kb on + strandat 728.098 kb on + strandat 728.102 kb on + strandat 728.102 kb on + strandat 728.102 kb on + strandat 728.102 kb on + strandat 728.102 kb on + strandat 728.102 kb on + strandat 728.102 kb on + strandat 728.102 kb on + strandat 728.121 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
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725,806 + -0.2
725,806 + +0.8
725,807 - +0.1
725,831 + -0.1
725,831 + -0.3
725,888 + -1.7
725,888 + +1.7
725,888 + -0.5
726,414 + MPMX19_00705 0.61 -1.2
726,414 + MPMX19_00705 0.61 -1.7
726,414 + MPMX19_00705 0.61 -0.7
726,507 + MPMX19_00705 0.72 -1.3
726,507 + MPMX19_00705 0.72 -0.7
726,507 + MPMX19_00705 0.72 +0.1
726,507 + MPMX19_00705 0.72 -0.3
726,507 + MPMX19_00705 0.72 -1.3
726,507 + MPMX19_00705 0.72 -1.6
726,507 + MPMX19_00705 0.72 +0.1
726,507 + MPMX19_00705 0.72 +1.7
726,507 + MPMX19_00705 0.72 -1.2
726,510 + MPMX19_00705 0.72 -2.4
726,510 + MPMX19_00705 0.72 -0.3
726,510 + MPMX19_00705 0.72 -0.7
726,510 + MPMX19_00705 0.72 +1.1
726,510 + MPMX19_00705 0.72 -1.2
726,510 + MPMX19_00705 0.72 -1.7
726,510 + MPMX19_00705 0.72 +0.1
726,510 + MPMX19_00705 0.72 -1.9
728,071 + +0.2
728,071 + -0.2
728,098 + +0.5
728,098 + +0.4
728,098 + +0.2
728,098 + -2.2
728,098 + -1.5
728,102 + +0.1
728,102 + -1.5
728,102 + -0.2
728,102 + -1.3
728,102 + -1.7
728,102 + -0.3
728,102 + -1.2
728,102 + -2.2
728,121 + -0.7

Or see this region's nucleotide sequence