Strain Fitness in Escherichia coli ECRC62 around BNILDI_14855

Experiment: RB68

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 nttnp-ISL3 and BNILDI_14855 are separated by 651 nucleotidesBNILDI_14855 and BNILDI_14860 are separated by 21 nucleotides BNILDI_14850: tnp-ISL3 - ISL3 family transposase, at 2,994,443 to 2,995,822 tnp-ISL3 BNILDI_14855: BNILDI_14855 - phosphotriesterase-related protein, at 2,996,474 to 2,996,800 _14855 BNILDI_14860: BNILDI_14860 - IS3 element transposase, at 2,996,822 to 2,997,358 _14860 Position (kb) 2996 2997Strain fitness (log2 ratio) -2 -1 0 1 2 3at 2995.506 kb on + strand, within tnp-ISL3at 2995.528 kb on + strand, within tnp-ISL3at 2995.529 kb on - strand, within tnp-ISL3at 2995.532 kb on + strand, within tnp-ISL3at 2995.533 kb on - strand, within tnp-ISL3at 2995.642 kb on + strand, within tnp-ISL3at 2995.738 kb on + strandat 2995.738 kb on + strandat 2995.739 kb on - strandat 2995.741 kb on + strandat 2995.742 kb on - strandat 2995.836 kb on + strandat 2995.836 kb on + strandat 2995.837 kb on - strandat 2995.924 kb on - strandat 2996.006 kb on + strandat 2996.007 kb on - strandat 2996.007 kb on - strandat 2996.007 kb on - strandat 2996.032 kb on + strandat 2996.122 kb on + strandat 2996.127 kb on - strandat 2996.160 kb on - strandat 2996.359 kb on + strandat 2996.432 kb on + strandat 2996.476 kb on - strandat 2996.506 kb on + strandat 2996.773 kb on + strandat 2996.794 kb on - strandat 2997.262 kb on + strand, within BNILDI_14860at 2997.461 kb on + strandat 2997.461 kb on + strandat 2997.494 kb on + strandat 2997.494 kb on + strandat 2997.547 kb on + strandat 2997.547 kb on + strandat 2997.588 kb on - strandat 2997.592 kb on - strandat 2997.592 kb on - strandat 2997.610 kb on + strandat 2997.648 kb on - strandat 2997.658 kb on - strandat 2997.661 kb on - strandat 2997.663 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction RB68
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2,995,506 + tnp-ISL3 BNILDI_14850 0.77 +1.2
2,995,528 + tnp-ISL3 BNILDI_14850 0.79 +1.3
2,995,529 - tnp-ISL3 BNILDI_14850 0.79 +0.1
2,995,532 + tnp-ISL3 BNILDI_14850 0.79 -0.6
2,995,533 - tnp-ISL3 BNILDI_14850 0.79 -0.3
2,995,642 + tnp-ISL3 BNILDI_14850 0.87 -0.9
2,995,738 + -0.6
2,995,738 + +1.3
2,995,739 - -0.4
2,995,741 + +1.9
2,995,742 - -0.7
2,995,836 + -1.6
2,995,836 + +1.5
2,995,837 - +0.4
2,995,924 - +0.9
2,996,006 + +1.3
2,996,007 - +1.9
2,996,007 - -0.7
2,996,007 - -0.6
2,996,032 + +1.9
2,996,122 + +0.5
2,996,127 - +0.6
2,996,160 - +0.5
2,996,359 + +0.1
2,996,432 + -1.4
2,996,476 - +0.6
2,996,506 + -1.9
2,996,773 + -0.5
2,996,794 - -1.1
2,997,262 + BNILDI_14860 0.82 +0.9
2,997,461 + +1.9
2,997,461 + +0.9
2,997,494 + -1.3
2,997,494 + -0.4
2,997,547 + +0.9
2,997,547 + +1.9
2,997,588 - -0.1
2,997,592 - +2.9
2,997,592 - -0.5
2,997,610 + -0.0
2,997,648 - -0.8
2,997,658 - +1.9
2,997,661 - -1.6
2,997,663 + +0.3

Or see this region's nucleotide sequence