Experiment: RB68
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt fruB and fruB overlap by 1 nucleotides fruB and fruA are separated by 16 nucleotides
BNILDI_13930: fruB - fused PTS fructose transporter subunit IIA/HPr protein, at 2,803,847 to 2,804,977
fruB
BNILDI_13935: fruB - fused PTS fructose transporter subunit IIA/HPr protein, at 2,804,977 to 2,805,915
fruB
BNILDI_13940: fruA - PTS fructose transporter subunit IIBC, at 2,805,932 to 2,807,623
fruA
Position (kb)
2804
2805
2806 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2804.018 kb on - strand, within fruB at 2804.126 kb on + strand, within fruB at 2804.127 kb on - strand, within fruB at 2804.127 kb on - strand, within fruB at 2804.446 kb on + strand, within fruB at 2804.447 kb on - strand, within fruB at 2804.620 kb on + strand, within fruB at 2804.842 kb on + strand, within fruB at 2804.994 kb on + strand at 2804.997 kb on + strand at 2805.252 kb on + strand, within fruB at 2805.494 kb on + strand, within fruB at 2805.497 kb on + strand, within fruB at 2805.624 kb on + strand, within fruB at 2805.639 kb on + strand, within fruB at 2805.910 kb on - strand at 2805.981 kb on - strand at 2806.249 kb on - strand, within fruA at 2806.249 kb on - strand, within fruA at 2806.472 kb on + strand, within fruA at 2806.472 kb on + strand, within fruA at 2806.473 kb on - strand, within fruA at 2806.589 kb on - strand, within fruA at 2806.637 kb on + strand, within fruA at 2806.637 kb on + strand, within fruA at 2806.637 kb on + strand, within fruA at 2806.637 kb on + strand, within fruA at 2806.638 kb on - strand, within fruA at 2806.793 kb on + strand, within fruA at 2806.794 kb on - strand, within fruA at 2806.794 kb on - strand, within fruA at 2806.889 kb on - strand, within fruA at 2806.892 kb on - strand, within fruA at 2806.892 kb on - strand, within fruA at 2806.914 kb on - strand, within fruA
Per-strain Table
Position Strand Gene LocusTag Fraction RB68 remove 2,804,018 - fruB BNILDI_13930 0.15 +0.5 2,804,126 + fruB BNILDI_13930 0.25 +1.8 2,804,127 - fruB BNILDI_13930 0.25 +0.2 2,804,127 - fruB BNILDI_13930 0.25 +1.2 2,804,446 + fruB BNILDI_13930 0.53 +0.8 2,804,447 - fruB BNILDI_13930 0.53 -0.7 2,804,620 + fruB BNILDI_13930 0.68 +0.8 2,804,842 + fruB BNILDI_13930 0.88 +1.2 2,804,994 + -1.2 2,804,997 + -1.8 2,805,252 + fruB BNILDI_13935 0.29 -0.8 2,805,494 + fruB BNILDI_13935 0.55 +0.2 2,805,497 + fruB BNILDI_13935 0.55 -1.4 2,805,624 + fruB BNILDI_13935 0.69 -2.1 2,805,639 + fruB BNILDI_13935 0.71 +0.8 2,805,910 - -0.4 2,805,981 - -1.6 2,806,249 - fruA BNILDI_13940 0.19 +2.8 2,806,249 - fruA BNILDI_13940 0.19 -1.6 2,806,472 + fruA BNILDI_13940 0.32 +2.0 2,806,472 + fruA BNILDI_13940 0.32 +0.5 2,806,473 - fruA BNILDI_13940 0.32 -0.5 2,806,589 - fruA BNILDI_13940 0.39 -0.2 2,806,637 + fruA BNILDI_13940 0.42 +1.2 2,806,637 + fruA BNILDI_13940 0.42 -1.1 2,806,637 + fruA BNILDI_13940 0.42 -0.6 2,806,637 + fruA BNILDI_13940 0.42 -1.9 2,806,638 - fruA BNILDI_13940 0.42 +0.8 2,806,793 + fruA BNILDI_13940 0.51 +0.9 2,806,794 - fruA BNILDI_13940 0.51 -0.9 2,806,794 - fruA BNILDI_13940 0.51 -0.5 2,806,889 - fruA BNILDI_13940 0.57 -0.2 2,806,892 - fruA BNILDI_13940 0.57 -0.5 2,806,892 - fruA BNILDI_13940 0.57 -0.8 2,806,914 - fruA BNILDI_13940 0.58 +1.8
Or see this region's nucleotide sequence