Experiment: RB68
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt groL and yjeI are separated by 137 nucleotides yjeI and BNILDI_06825 are separated by 252 nucleotides BNILDI_06825 and BNILDI_06830 are separated by 248 nucleotides
BNILDI_06815: groL - chaperonin GroEL, at 1,365,049 to 1,366,695
groL
BNILDI_06820: yjeI - Uncharacterized protein YjeI, at 1,366,833 to 1,367,186
yjeI
BNILDI_06825: BNILDI_06825 - IS110-like element IS621 family transposase, at 1,367,439 to 1,368,419
_06825
BNILDI_06830: BNILDI_06830 - Protein, at 1,368,668 to 1,369,537
_06830
Position (kb)
1367
1368
1369 Strain fitness (log2 ratio)
-2
-1
0
1 at 1366.693 kb on + strand at 1366.693 kb on + strand at 1366.693 kb on + strand at 1366.694 kb on - strand at 1366.694 kb on - strand at 1366.770 kb on + strand at 1366.771 kb on - strand at 1366.771 kb on - strand at 1366.771 kb on - strand at 1366.774 kb on - strand at 1366.775 kb on + strand at 1366.776 kb on - strand at 1366.776 kb on - strand at 1366.845 kb on + strand at 1366.849 kb on + strand at 1366.890 kb on - strand, within yjeI at 1366.928 kb on - strand, within yjeI at 1366.985 kb on + strand, within yjeI at 1366.986 kb on - strand, within yjeI at 1366.986 kb on - strand, within yjeI at 1367.033 kb on + strand, within yjeI at 1367.094 kb on + strand, within yjeI at 1367.169 kb on + strand at 1367.171 kb on + strand at 1367.172 kb on - strand at 1367.172 kb on - strand at 1367.172 kb on - strand at 1367.172 kb on - strand at 1367.214 kb on + strand at 1367.215 kb on - strand at 1367.215 kb on - strand at 1367.215 kb on - strand at 1367.251 kb on - strand at 1367.251 kb on - strand at 1367.251 kb on - strand at 1367.251 kb on - strand at 1368.669 kb on + strand at 1368.669 kb on + strand at 1368.710 kb on + strand at 1368.710 kb on + strand at 1368.711 kb on - strand at 1368.711 kb on - strand at 1368.729 kb on - strand at 1368.783 kb on + strand, within BNILDI_06830 at 1368.784 kb on - strand, within BNILDI_06830 at 1369.003 kb on - strand, within BNILDI_06830 at 1369.067 kb on - strand, within BNILDI_06830 at 1369.074 kb on - strand, within BNILDI_06830 at 1369.074 kb on - strand, within BNILDI_06830 at 1369.074 kb on - strand, within BNILDI_06830 at 1369.157 kb on + strand, within BNILDI_06830 at 1369.363 kb on + strand, within BNILDI_06830 at 1369.363 kb on + strand, within BNILDI_06830
Per-strain Table
Position Strand Gene LocusTag Fraction RB68 remove 1,366,693 + +1.2 1,366,693 + +0.3 1,366,693 + -0.3 1,366,694 - +0.7 1,366,694 - +1.0 1,366,770 + -0.3 1,366,771 - -0.3 1,366,771 - -0.4 1,366,771 - -1.1 1,366,774 - -0.5 1,366,775 + -1.4 1,366,776 - +0.1 1,366,776 - -0.0 1,366,845 + +0.4 1,366,849 + -0.6 1,366,890 - yjeI BNILDI_06820 0.16 +0.7 1,366,928 - yjeI BNILDI_06820 0.27 +0.7 1,366,985 + yjeI BNILDI_06820 0.43 +1.7 1,366,986 - yjeI BNILDI_06820 0.43 -0.6 1,366,986 - yjeI BNILDI_06820 0.43 +0.3 1,367,033 + yjeI BNILDI_06820 0.56 +0.7 1,367,094 + yjeI BNILDI_06820 0.74 -0.7 1,367,169 + +1.5 1,367,171 + -1.3 1,367,172 - +1.0 1,367,172 - -0.3 1,367,172 - -0.6 1,367,172 - -0.3 1,367,214 + +0.1 1,367,215 - -0.1 1,367,215 - -0.8 1,367,215 - +1.4 1,367,251 - +0.8 1,367,251 - -0.7 1,367,251 - -1.9 1,367,251 - -0.2 1,368,669 + -1.5 1,368,669 + -0.5 1,368,710 + -0.5 1,368,710 + -0.6 1,368,711 - +1.3 1,368,711 - -0.2 1,368,729 - +0.7 1,368,783 + BNILDI_06830 0.13 +0.1 1,368,784 - BNILDI_06830 0.13 -1.4 1,369,003 - BNILDI_06830 0.39 -1.6 1,369,067 - BNILDI_06830 0.46 -0.0 1,369,074 - BNILDI_06830 0.47 -1.8 1,369,074 - BNILDI_06830 0.47 +0.3 1,369,074 - BNILDI_06830 0.47 -0.7 1,369,157 + BNILDI_06830 0.56 +0.0 1,369,363 + BNILDI_06830 0.80 -1.3 1,369,363 + BNILDI_06830 0.80 +0.3
Or see this region's nucleotide sequence