Strain Fitness in Escherichia coli ECRC62 around BNILDI_20510

Experiment: RB68

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RB68
4,134,073	-	ybjT	BNILDI_20505	0.40	+1.4
4,134,073	-	ybjT	BNILDI_20505	0.40	-0.1
4,134,073	-	ybjT	BNILDI_20505	0.40	+1.8
4,134,088	+	ybjT	BNILDI_20505	0.41	+0.3
4,134,088	+	ybjT	BNILDI_20505	0.41	+1.2
4,134,089	-	ybjT	BNILDI_20505	0.41	-0.4
4,134,254	+	ybjT	BNILDI_20505	0.52	-0.2
4,134,254	+	ybjT	BNILDI_20505	0.52	-0.4
4,134,380	+	ybjT	BNILDI_20505	0.61	+1.0
4,134,380	+	ybjT	BNILDI_20505	0.61	+1.2
4,134,381	-	ybjT	BNILDI_20505	0.61	-0.7
4,134,535	+	ybjT	BNILDI_20505	0.72	-1.0
4,134,536	-	ybjT	BNILDI_20505	0.72	-1.0
4,134,624	-	ybjT	BNILDI_20505	0.78	+0.3
4,134,654	+	ybjT	BNILDI_20505	0.80	+2.1
4,134,658	+	ybjT	BNILDI_20505	0.81	+1.8
4,134,681	-	ybjT	BNILDI_20505	0.82	-1.1
4,134,720	-	ybjT	BNILDI_20505	0.85	+2.8
4,134,720	-	ybjT	BNILDI_20505	0.85	+1.2
4,134,790	-	ybjT	BNILDI_20505	0.90	-0.7
4,134,794	+				-0.3
4,134,794	+				+0.8
4,134,794	+				-0.5
4,134,798	-				+0.4
4,135,068	+				-1.2
4,135,213	+	ybjS	BNILDI_20510	0.18	+0.2
4,135,213	+	ybjS	BNILDI_20510	0.18	+0.5
4,135,214	-	ybjS	BNILDI_20510	0.18	+0.8
4,135,238	-	ybjS	BNILDI_20510	0.20	-0.7
4,135,261	+	ybjS	BNILDI_20510	0.22	-0.5
4,135,262	-	ybjS	BNILDI_20510	0.22	+1.0
4,135,366	+	ybjS	BNILDI_20510	0.33	+1.5
4,135,366	+	ybjS	BNILDI_20510	0.33	-0.0
4,135,395	-	ybjS	BNILDI_20510	0.36	-0.1
4,135,490	-	ybjS	BNILDI_20510	0.45	+2.8
4,135,523	-	ybjS	BNILDI_20510	0.48	+0.1
4,135,652	+	ybjS	BNILDI_20510	0.61	+0.7
4,135,652	+	ybjS	BNILDI_20510	0.61	+1.4
4,135,652	+	ybjS	BNILDI_20510	0.61	+0.3
4,135,653	-	ybjS	BNILDI_20510	0.61	-1.9
4,135,727	+	ybjS	BNILDI_20510	0.68	+0.2
4,135,728	-	ybjS	BNILDI_20510	0.68	-0.5
4,135,728	-	ybjS	BNILDI_20510	0.68	+0.2
4,135,795	+	ybjS	BNILDI_20510	0.75	-0.4
4,135,930	+	ybjS	BNILDI_20510	0.88	+0.7
4,135,931	-	ybjS	BNILDI_20510	0.88	+1.2
4,135,940	-	ybjS	BNILDI_20510	0.89	-1.8
4,135,943	-	ybjS	BNILDI_20510	0.90	-0.5
4,135,962	+				+0.1
4,135,963	-				-1.0
4,135,963	-				+0.2
4,136,058	-				-1.8
4,136,113	-				+0.5
4,136,114	+				-0.1
4,136,114	+				-0.1
4,136,115	-				+1.2
4,136,116	+				-0.8
4,136,336	-	amiD	BNILDI_20515	0.35	+0.8
4,136,419	-	amiD	BNILDI_20515	0.45	+1.0
4,136,422	-	amiD	BNILDI_20515	0.45	-0.7
4,136,422	-	amiD	BNILDI_20515	0.45	+0.4
4,136,422	-	amiD	BNILDI_20515	0.45	+1.2
4,136,422	-	amiD	BNILDI_20515	0.45	+1.1
4,136,477	+	amiD	BNILDI_20515	0.52	+2.0
4,136,661	-	amiD	BNILDI_20515	0.74	-0.8
4,136,703	+	amiD	BNILDI_20515	0.79	+0.8
4,136,742	+	amiD	BNILDI_20515	0.84	-0.0
4,136,742	+	amiD	BNILDI_20515	0.84	+0.2
4,136,918	+	ybjQ	BNILDI_20520	0.15	-0.1
4,136,918	+	ybjQ	BNILDI_20520	0.15	-0.0
4,136,919	-	ybjQ	BNILDI_20520	0.15	+0.6
4,137,030	-	ybjQ	BNILDI_20520	0.49	+0.1