Strain Fitness in Escherichia coli ECRC62 around BNILDI_17280

Experiment: RB68

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RB68
3,459,715	-	tam	BNILDI_17270	0.28	-0.1
3,459,717	+	tam	BNILDI_17270	0.28	+1.3
3,459,718	-	tam	BNILDI_17270	0.28	-1.5
3,459,764	-	tam	BNILDI_17270	0.34	+0.2
3,459,768	+	tam	BNILDI_17270	0.35	+1.2
3,459,772	-	tam	BNILDI_17270	0.35	+0.6
3,459,905	-	tam	BNILDI_17270	0.53	+2.8
3,460,164	+	tam	BNILDI_17270	0.87	+0.4
3,460,239	+				-1.2
3,460,239	+				+1.4
3,460,241	+				+0.3
3,460,242	-				-0.0
3,460,270	+				+2.2
3,460,271	-				-0.9
3,460,299	-				-1.1
3,460,444	-	lsrG	BNILDI_17275	0.42	-0.8
3,460,458	+	lsrG	BNILDI_17275	0.47	-0.0
3,460,461	-	lsrG	BNILDI_17275	0.48	+0.6
3,460,611	+				-0.0
3,460,612	-				+2.8
3,460,655	-				-0.1
3,460,746	-	lsrF	BNILDI_17280	0.13	-1.5
3,460,895	-	lsrF	BNILDI_17280	0.30	-1.3
3,460,897	+	lsrF	BNILDI_17280	0.30	-1.0
3,461,084	-	lsrF	BNILDI_17280	0.51	-0.7
3,461,259	+	lsrF	BNILDI_17280	0.71	+2.3
3,461,259	+	lsrF	BNILDI_17280	0.71	-1.4
3,461,294	+	lsrF	BNILDI_17280	0.75	-0.8
3,461,294	+	lsrF	BNILDI_17280	0.75	+2.8
3,461,333	-	lsrF	BNILDI_17280	0.80	-2.4
3,461,500	-				-0.0
3,461,525	-				+0.3
3,461,595	-				+0.8
3,461,620	-				-0.2
3,461,730	+	lsrB	BNILDI_17285	0.19	+0.8
3,461,730	+	lsrB	BNILDI_17285	0.19	+0.5
3,461,799	+	lsrB	BNILDI_17285	0.26	-0.4
3,461,800	-	lsrB	BNILDI_17285	0.26	+1.2
3,461,928	+	lsrB	BNILDI_17285	0.38	-1.0
3,461,928	+	lsrB	BNILDI_17285	0.38	-0.3
3,461,929	-	lsrB	BNILDI_17285	0.38	+2.4
3,461,940	-	lsrB	BNILDI_17285	0.39	+0.2
3,461,957	+	lsrB	BNILDI_17285	0.41	-0.4
3,462,113	-	lsrB	BNILDI_17285	0.56	+1.2
3,462,134	-	lsrB	BNILDI_17285	0.58	-0.1
3,462,145	+	lsrB	BNILDI_17285	0.59	-1.4
3,462,145	+	lsrB	BNILDI_17285	0.59	-0.0
3,462,176	-	lsrB	BNILDI_17285	0.62	+1.5
3,462,176	-	lsrB	BNILDI_17285	0.62	-1.6
3,462,202	+	lsrB	BNILDI_17285	0.65	-0.0
3,462,307	-	lsrB	BNILDI_17285	0.75	-0.9
3,462,338	+	lsrB	BNILDI_17285	0.78	+1.8
3,462,339	-	lsrB	BNILDI_17285	0.78	+0.1
3,462,473	-				+3.1
3,462,497	-				-0.0