Experiment: RB68
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt wzxC and wcaK are separated by 371 nucleotides wcaK and wcaL overlap by 4 nucleotides
BNILDI_14625: wzxC - colanic acid undecaprenyl disphosphate flippase WzxC, at 2,954,587 to 2,956,065
wzxC
BNILDI_14640: wcaK - colanic acid biosynthesis pyruvyl transferase WcaK, at 2,956,437 to 2,957,717
wcaK
BNILDI_14645: wcaL - colanic acid biosynthesis glycosyltransferase WcaL, at 2,957,714 to 2,958,934
wcaL
Position (kb)
2956
2957
2958 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2955.556 kb on - strand, within wzxC at 2955.556 kb on - strand, within wzxC at 2955.796 kb on - strand, within wzxC at 2955.826 kb on + strand, within wzxC at 2955.853 kb on + strand, within wzxC at 2956.053 kb on - strand at 2956.107 kb on + strand at 2956.108 kb on - strand at 2956.158 kb on + strand at 2956.246 kb on - strand at 2956.426 kb on - strand at 2956.448 kb on + strand at 2956.504 kb on + strand at 2956.505 kb on - strand at 2956.700 kb on - strand, within wcaK at 2956.700 kb on - strand, within wcaK at 2956.736 kb on + strand, within wcaK at 2956.737 kb on - strand, within wcaK at 2956.833 kb on + strand, within wcaK at 2956.871 kb on + strand, within wcaK at 2956.934 kb on + strand, within wcaK at 2956.934 kb on + strand, within wcaK at 2956.943 kb on - strand, within wcaK at 2956.950 kb on + strand, within wcaK at 2957.021 kb on + strand, within wcaK at 2957.101 kb on - strand, within wcaK at 2957.298 kb on + strand, within wcaK at 2957.298 kb on + strand, within wcaK at 2957.299 kb on - strand, within wcaK at 2957.299 kb on - strand, within wcaK at 2957.299 kb on - strand, within wcaK at 2957.300 kb on + strand, within wcaK at 2957.368 kb on + strand, within wcaK at 2957.369 kb on - strand, within wcaK at 2957.369 kb on - strand, within wcaK at 2957.456 kb on + strand, within wcaK at 2957.457 kb on - strand, within wcaK at 2957.504 kb on + strand, within wcaK at 2957.505 kb on - strand, within wcaK at 2957.556 kb on - strand, within wcaK at 2957.567 kb on - strand, within wcaK at 2957.868 kb on - strand, within wcaL at 2957.908 kb on + strand, within wcaL at 2957.909 kb on - strand, within wcaL at 2957.909 kb on - strand, within wcaL at 2957.974 kb on + strand, within wcaL at 2958.158 kb on - strand, within wcaL at 2958.331 kb on - strand, within wcaL at 2958.331 kb on - strand, within wcaL at 2958.334 kb on + strand, within wcaL at 2958.536 kb on + strand, within wcaL at 2958.537 kb on - strand, within wcaL at 2958.571 kb on + strand, within wcaL
Per-strain Table
Position Strand Gene LocusTag Fraction RB68 remove 2,955,556 - wzxC BNILDI_14625 0.66 -0.4 2,955,556 - wzxC BNILDI_14625 0.66 -0.3 2,955,796 - wzxC BNILDI_14625 0.82 -0.4 2,955,826 + wzxC BNILDI_14625 0.84 +0.6 2,955,853 + wzxC BNILDI_14625 0.86 +1.3 2,956,053 - +0.6 2,956,107 + +1.9 2,956,108 - +0.6 2,956,158 + +0.6 2,956,246 - +0.8 2,956,426 - -0.6 2,956,448 + -0.4 2,956,504 + -1.8 2,956,505 - +1.9 2,956,700 - wcaK BNILDI_14640 0.21 -1.3 2,956,700 - wcaK BNILDI_14640 0.21 -1.6 2,956,736 + wcaK BNILDI_14640 0.23 +1.2 2,956,737 - wcaK BNILDI_14640 0.23 -1.8 2,956,833 + wcaK BNILDI_14640 0.31 -0.4 2,956,871 + wcaK BNILDI_14640 0.34 +0.1 2,956,934 + wcaK BNILDI_14640 0.39 +0.9 2,956,934 + wcaK BNILDI_14640 0.39 -1.0 2,956,943 - wcaK BNILDI_14640 0.40 -0.8 2,956,950 + wcaK BNILDI_14640 0.40 +1.1 2,957,021 + wcaK BNILDI_14640 0.46 -0.7 2,957,101 - wcaK BNILDI_14640 0.52 +1.1 2,957,298 + wcaK BNILDI_14640 0.67 -1.1 2,957,298 + wcaK BNILDI_14640 0.67 +0.4 2,957,299 - wcaK BNILDI_14640 0.67 +1.1 2,957,299 - wcaK BNILDI_14640 0.67 -0.3 2,957,299 - wcaK BNILDI_14640 0.67 +0.6 2,957,300 + wcaK BNILDI_14640 0.67 +0.7 2,957,368 + wcaK BNILDI_14640 0.73 +1.0 2,957,369 - wcaK BNILDI_14640 0.73 -0.8 2,957,369 - wcaK BNILDI_14640 0.73 +2.1 2,957,456 + wcaK BNILDI_14640 0.80 -0.4 2,957,457 - wcaK BNILDI_14640 0.80 -2.0 2,957,504 + wcaK BNILDI_14640 0.83 +0.2 2,957,505 - wcaK BNILDI_14640 0.83 -0.8 2,957,556 - wcaK BNILDI_14640 0.87 +0.6 2,957,567 - wcaK BNILDI_14640 0.88 +1.1 2,957,868 - wcaL BNILDI_14645 0.13 -0.1 2,957,908 + wcaL BNILDI_14645 0.16 -0.0 2,957,909 - wcaL BNILDI_14645 0.16 +0.1 2,957,909 - wcaL BNILDI_14645 0.16 -0.1 2,957,974 + wcaL BNILDI_14645 0.21 +1.7 2,958,158 - wcaL BNILDI_14645 0.36 +0.1 2,958,331 - wcaL BNILDI_14645 0.51 +1.2 2,958,331 - wcaL BNILDI_14645 0.51 +1.5 2,958,334 + wcaL BNILDI_14645 0.51 +1.2 2,958,536 + wcaL BNILDI_14645 0.67 +1.7 2,958,537 - wcaL BNILDI_14645 0.67 -0.1 2,958,571 + wcaL BNILDI_14645 0.70 -0.0
Or see this region's nucleotide sequence