Strain Fitness in Escherichia coli ECRC62 around BNILDI_09685

Experiment: RB68

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RB68
1,948,238	+	yggM	BNILDI_09670	0.28	-2.9
1,948,239	-	yggM	BNILDI_09670	0.28	+0.9
1,948,239	-	yggM	BNILDI_09670	0.28	-0.9
1,948,370	+	yggM	BNILDI_09670	0.41	+0.1
1,948,371	-	yggM	BNILDI_09670	0.41	+0.1
1,948,374	+	yggM	BNILDI_09670	0.41	-1.1
1,948,374	+	yggM	BNILDI_09670	0.41	-0.7
1,948,412	+	yggM	BNILDI_09670	0.45	+0.1
1,948,574	+	yggM	BNILDI_09670	0.61	+0.9
1,948,638	-	yggM	BNILDI_09670	0.68	+0.8
1,948,642	-	yggM	BNILDI_09670	0.68	-0.9
1,948,682	+	yggM	BNILDI_09670	0.72	+1.3
1,948,701	+	yggM	BNILDI_09670	0.74	+0.6
1,948,702	-	yggM	BNILDI_09670	0.74	-0.2
1,948,702	-	yggM	BNILDI_09670	0.74	-0.1
1,948,788	-	yggM	BNILDI_09670	0.82	+0.1
1,948,958	+				-0.1
1,948,958	+				+2.5
1,948,958	+				+0.2
1,948,958	+				+4.1
1,948,963	-				-3.2
1,948,973	+				+0.7
1,948,973	+				+0.2
1,948,973	+				+1.5
1,948,973	+				-0.3
1,948,974	-				+1.5
1,948,974	-				-0.1
1,949,051	-				-0.7
1,949,137	+				+0.7
1,949,165	-				-1.0
1,949,565	-	hemW	BNILDI_09685	0.32	+1.5
1,949,637	-	hemW	BNILDI_09685	0.38	+2.5
1,949,663	-	hemW	BNILDI_09685	0.40	-1.0
1,949,684	-	hemW	BNILDI_09685	0.42	-1.1
1,949,739	+	hemW	BNILDI_09685	0.47	-0.7
1,949,740	-	hemW	BNILDI_09685	0.47	-0.7
1,949,743	-	hemW	BNILDI_09685	0.47	-2.5
1,949,804	-	hemW	BNILDI_09685	0.53	+0.5
1,949,869	-	hemW	BNILDI_09685	0.58	-0.3
1,949,869	-	hemW	BNILDI_09685	0.58	-1.0
1,949,976	+	hemW	BNILDI_09685	0.68	+0.4
1,950,054	+	hemW	BNILDI_09685	0.75	-0.9
1,950,166	+	hemW	BNILDI_09685	0.84	+1.5
1,950,167	-	hemW	BNILDI_09685	0.85	-0.3
1,950,186	-	hemW	BNILDI_09685	0.86	-0.3
1,950,314	+				+0.0
1,950,337	-				+0.7
1,950,515	-	rdgB	BNILDI_09690	0.30	-2.1
1,950,558	+	rdgB	BNILDI_09690	0.38	+0.3
1,950,559	-	rdgB	BNILDI_09690	0.38	-1.7
1,950,559	-	rdgB	BNILDI_09690	0.38	-1.4
1,950,560	+	rdgB	BNILDI_09690	0.38	+1.5
1,950,560	+	rdgB	BNILDI_09690	0.38	-0.6
1,950,560	+	rdgB	BNILDI_09690	0.38	-1.0
1,950,561	-	rdgB	BNILDI_09690	0.38	+0.0
1,950,678	+	rdgB	BNILDI_09690	0.58	+1.2
1,950,678	+	rdgB	BNILDI_09690	0.58	+0.0
1,950,679	-	rdgB	BNILDI_09690	0.58	-2.4
1,950,707	+	rdgB	BNILDI_09690	0.63	-0.7
1,950,933	+				-1.4
1,950,938	-				+1.1
1,950,938	-				-0.3
1,950,938	-				+0.1
1,950,938	-				+2.5
1,950,942	-				-0.1
1,951,124	+	yggU	BNILDI_09695	0.65	+0.5
1,951,125	-	yggU	BNILDI_09695	0.65	+0.1
1,951,140	+	yggU	BNILDI_09695	0.70	+0.9
1,951,180	+	yggU	BNILDI_09695	0.84	-1.6
1,951,180	+	yggU	BNILDI_09695	0.84	+3.1
1,951,180	+	yggU	BNILDI_09695	0.84	-1.1
1,951,208	+				+0.2
1,951,208	+				+1.1
1,951,208	+				+0.6
1,951,226	+				-0.9
1,951,271	+				-0.1
1,951,272	-				+1.9
1,951,275	-				-0.2
1,951,303	-	yggT	BNILDI_09700	0.14	+0.5
1,951,303	-	yggT	BNILDI_09700	0.14	+0.9