Experiment: RB68
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BNILDI_07620 and BNILDI_07625 overlap by 4 nucleotides BNILDI_07625 and BNILDI_07630 are separated by 62 nucleotides
BNILDI_07620: BNILDI_07620 - ATP-binding protein, at 1,521,014 to 1,523,068
_07620
BNILDI_07625: BNILDI_07625 - restriction endonuclease, at 1,523,065 to 1,524,375
_07625
BNILDI_07630: BNILDI_07630 - HNH endonuclease, at 1,524,438 to 1,525,310
_07630
Position (kb)
1523
1524
1525 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1522.130 kb on - strand, within BNILDI_07620 at 1522.262 kb on + strand, within BNILDI_07620 at 1522.490 kb on - strand, within BNILDI_07620 at 1522.547 kb on - strand, within BNILDI_07620 at 1522.688 kb on + strand, within BNILDI_07620 at 1522.702 kb on + strand, within BNILDI_07620 at 1522.703 kb on - strand, within BNILDI_07620 at 1522.911 kb on - strand at 1523.273 kb on - strand, within BNILDI_07625 at 1523.706 kb on - strand, within BNILDI_07625 at 1523.718 kb on - strand, within BNILDI_07625 at 1523.769 kb on + strand, within BNILDI_07625 at 1523.812 kb on + strand, within BNILDI_07625 at 1523.813 kb on - strand, within BNILDI_07625 at 1523.826 kb on - strand, within BNILDI_07625 at 1523.868 kb on + strand, within BNILDI_07625 at 1523.960 kb on - strand, within BNILDI_07625 at 1524.173 kb on - strand, within BNILDI_07625 at 1524.173 kb on - strand, within BNILDI_07625 at 1524.218 kb on - strand, within BNILDI_07625 at 1524.268 kb on - strand at 1524.417 kb on - strand at 1524.759 kb on + strand, within BNILDI_07630 at 1524.773 kb on - strand, within BNILDI_07630 at 1524.776 kb on + strand, within BNILDI_07630 at 1524.897 kb on + strand, within BNILDI_07630 at 1524.914 kb on + strand, within BNILDI_07630 at 1524.914 kb on + strand, within BNILDI_07630 at 1524.949 kb on + strand, within BNILDI_07630 at 1524.983 kb on - strand, within BNILDI_07630 at 1525.050 kb on + strand, within BNILDI_07630 at 1525.074 kb on + strand, within BNILDI_07630 at 1525.075 kb on - strand, within BNILDI_07630 at 1525.075 kb on - strand, within BNILDI_07630 at 1525.091 kb on + strand, within BNILDI_07630 at 1525.092 kb on - strand, within BNILDI_07630 at 1525.134 kb on + strand, within BNILDI_07630
Per-strain Table
Position Strand Gene LocusTag Fraction RB68 remove 1,522,130 - BNILDI_07620 0.54 -1.0 1,522,262 + BNILDI_07620 0.61 +1.4 1,522,490 - BNILDI_07620 0.72 -0.4 1,522,547 - BNILDI_07620 0.75 +0.4 1,522,688 + BNILDI_07620 0.81 +0.4 1,522,702 + BNILDI_07620 0.82 -2.2 1,522,703 - BNILDI_07620 0.82 -1.0 1,522,911 - -3.1 1,523,273 - BNILDI_07625 0.16 -2.0 1,523,706 - BNILDI_07625 0.49 -0.8 1,523,718 - BNILDI_07625 0.50 -1.7 1,523,769 + BNILDI_07625 0.54 -0.4 1,523,812 + BNILDI_07625 0.57 -2.7 1,523,813 - BNILDI_07625 0.57 +2.4 1,523,826 - BNILDI_07625 0.58 -0.8 1,523,868 + BNILDI_07625 0.61 -1.4 1,523,960 - BNILDI_07625 0.68 -0.5 1,524,173 - BNILDI_07625 0.85 -1.3 1,524,173 - BNILDI_07625 0.85 -0.9 1,524,218 - BNILDI_07625 0.88 +0.1 1,524,268 - -0.6 1,524,417 - +0.3 1,524,759 + BNILDI_07630 0.37 +0.2 1,524,773 - BNILDI_07630 0.38 +0.9 1,524,776 + BNILDI_07630 0.39 +0.1 1,524,897 + BNILDI_07630 0.53 +0.4 1,524,914 + BNILDI_07630 0.55 +0.1 1,524,914 + BNILDI_07630 0.55 +2.4 1,524,949 + BNILDI_07630 0.59 -0.1 1,524,983 - BNILDI_07630 0.62 +1.2 1,525,050 + BNILDI_07630 0.70 -1.6 1,525,074 + BNILDI_07630 0.73 +0.1 1,525,075 - BNILDI_07630 0.73 +0.9 1,525,075 - BNILDI_07630 0.73 +0.0 1,525,091 + BNILDI_07630 0.75 -0.3 1,525,092 - BNILDI_07630 0.75 +0.1 1,525,134 + BNILDI_07630 0.80 +1.0
Or see this region's nucleotide sequence