Experiment: RB68
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt yhjX and yhjY are separated by 228 nucleotides yhjY and tag are separated by 157 nucleotides tag and yiaC overlap by 4 nucleotides
BNILDI_03550: yhjX - Uncharacterized MFS-type transporter YhjX, at 692,920 to 694,128
yhjX
BNILDI_03555: yhjY - Uncharacterized protein YhjY, at 694,357 to 695,055
yhjY
BNILDI_03560: tag - DNA-3-methyladenine glycosylase I, at 695,213 to 695,776
tag
BNILDI_03565: yiaC - N-acetyltransferase, at 695,773 to 696,213
yiaC
Position (kb) 694
695
696 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 693.411 kb on + strand, within yhjX at 693.434 kb on + strand, within yhjX at 693.434 kb on + strand, within yhjX at 693.698 kb on + strand, within yhjX at 693.698 kb on + strand, within yhjX at 693.777 kb on - strand, within yhjX at 693.964 kb on + strand, within yhjX at 693.965 kb on - strand, within yhjX at 694.030 kb on - strand at 694.046 kb on + strand at 694.081 kb on - strand at 694.134 kb on + strand at 694.135 kb on - strand at 694.148 kb on + strand at 694.192 kb on + strand at 694.383 kb on + strand at 694.385 kb on + strand at 694.386 kb on - strand at 694.386 kb on - strand at 694.392 kb on - strand at 694.402 kb on - strand at 694.405 kb on - strand at 694.437 kb on - strand, within yhjY at 694.446 kb on + strand, within yhjY at 694.447 kb on - strand, within yhjY at 694.447 kb on - strand, within yhjY at 694.464 kb on + strand, within yhjY at 694.465 kb on - strand, within yhjY at 694.465 kb on - strand, within yhjY at 694.475 kb on - strand, within yhjY at 694.570 kb on - strand, within yhjY at 694.572 kb on - strand, within yhjY at 694.572 kb on - strand, within yhjY at 694.627 kb on + strand, within yhjY at 694.632 kb on + strand, within yhjY at 694.633 kb on - strand, within yhjY at 694.694 kb on + strand, within yhjY at 694.694 kb on + strand, within yhjY at 694.694 kb on + strand, within yhjY at 694.694 kb on + strand, within yhjY at 694.694 kb on + strand, within yhjY at 694.694 kb on + strand, within yhjY at 694.694 kb on + strand, within yhjY at 694.695 kb on - strand, within yhjY at 694.695 kb on - strand, within yhjY at 694.695 kb on - strand, within yhjY at 694.747 kb on - strand, within yhjY at 694.758 kb on - strand, within yhjY at 694.759 kb on + strand, within yhjY at 694.860 kb on + strand, within yhjY at 694.876 kb on - strand, within yhjY at 694.876 kb on - strand, within yhjY at 694.914 kb on - strand, within yhjY at 694.951 kb on - strand, within yhjY at 694.952 kb on + strand, within yhjY at 694.952 kb on + strand, within yhjY at 694.953 kb on - strand, within yhjY at 694.953 kb on - strand, within yhjY at 694.953 kb on - strand, within yhjY at 695.021 kb on - strand at 695.021 kb on - strand at 695.090 kb on + strand at 695.090 kb on + strand at 695.091 kb on - strand at 695.094 kb on - strand at 695.122 kb on + strand at 695.123 kb on - strand at 695.125 kb on + strand at 695.200 kb on - strand at 695.212 kb on + strand at 695.213 kb on - strand at 695.249 kb on + strand at 695.251 kb on + strand at 695.251 kb on + strand at 695.252 kb on - strand at 695.258 kb on + strand at 695.266 kb on + strand at 695.497 kb on + strand, within tag at 695.498 kb on - strand, within tag at 695.498 kb on - strand, within tag at 695.571 kb on + strand, within tag at 695.833 kb on - strand, within yiaC at 695.855 kb on + strand, within yiaC at 695.856 kb on - strand, within yiaC at 695.856 kb on - strand, within yiaC at 695.902 kb on + strand, within yiaC at 695.902 kb on + strand, within yiaC at 695.902 kb on + strand, within yiaC at 695.903 kb on - strand, within yiaC at 695.968 kb on - strand, within yiaC at 696.046 kb on + strand, within yiaC at 696.046 kb on + strand, within yiaC at 696.046 kb on + strand, within yiaC at 696.046 kb on + strand, within yiaC at 696.047 kb on - strand, within yiaC
Per-strain Table
Position Strand Gene LocusTag Fraction RB68 remove 693,411 + yhjX BNILDI_03550 0.41 -0.2 693,434 + yhjX BNILDI_03550 0.43 +0.3 693,434 + yhjX BNILDI_03550 0.43 -0.1 693,698 + yhjX BNILDI_03550 0.64 +0.4 693,698 + yhjX BNILDI_03550 0.64 +0.9 693,777 - yhjX BNILDI_03550 0.71 +0.3 693,964 + yhjX BNILDI_03550 0.86 +0.7 693,965 - yhjX BNILDI_03550 0.86 +0.8 694,030 - +0.3 694,046 + -0.3 694,081 - -1.0 694,134 + -0.5 694,135 - +1.6 694,148 + -2.2 694,192 + +1.5 694,383 + -0.7 694,385 + -0.0 694,386 - -0.7 694,386 - +1.0 694,392 - -1.4 694,402 - -1.2 694,405 - -0.5 694,437 - yhjY BNILDI_03555 0.11 +0.3 694,446 + yhjY BNILDI_03555 0.13 -0.1 694,447 - yhjY BNILDI_03555 0.13 +0.9 694,447 - yhjY BNILDI_03555 0.13 +0.5 694,464 + yhjY BNILDI_03555 0.15 +0.3 694,465 - yhjY BNILDI_03555 0.15 -0.2 694,465 - yhjY BNILDI_03555 0.15 +3.3 694,475 - yhjY BNILDI_03555 0.17 +0.2 694,570 - yhjY BNILDI_03555 0.30 -1.3 694,572 - yhjY BNILDI_03555 0.31 -1.0 694,572 - yhjY BNILDI_03555 0.31 +0.3 694,627 + yhjY BNILDI_03555 0.39 +0.2 694,632 + yhjY BNILDI_03555 0.39 +0.2 694,633 - yhjY BNILDI_03555 0.39 +0.4 694,694 + yhjY BNILDI_03555 0.48 -1.3 694,694 + yhjY BNILDI_03555 0.48 +0.6 694,694 + yhjY BNILDI_03555 0.48 +0.4 694,694 + yhjY BNILDI_03555 0.48 +1.5 694,694 + yhjY BNILDI_03555 0.48 -0.4 694,694 + yhjY BNILDI_03555 0.48 -0.9 694,694 + yhjY BNILDI_03555 0.48 +0.5 694,695 - yhjY BNILDI_03555 0.48 -0.0 694,695 - yhjY BNILDI_03555 0.48 -0.6 694,695 - yhjY BNILDI_03555 0.48 -0.0 694,747 - yhjY BNILDI_03555 0.56 -1.3 694,758 - yhjY BNILDI_03555 0.57 +0.7 694,759 + yhjY BNILDI_03555 0.58 +3.9 694,860 + yhjY BNILDI_03555 0.72 +0.6 694,876 - yhjY BNILDI_03555 0.74 +0.3 694,876 - yhjY BNILDI_03555 0.74 +0.9 694,914 - yhjY BNILDI_03555 0.80 -0.3 694,951 - yhjY BNILDI_03555 0.85 +1.1 694,952 + yhjY BNILDI_03555 0.85 -0.9 694,952 + yhjY BNILDI_03555 0.85 -2.7 694,953 - yhjY BNILDI_03555 0.85 -1.0 694,953 - yhjY BNILDI_03555 0.85 +0.7 694,953 - yhjY BNILDI_03555 0.85 -0.7 695,021 - -0.6 695,021 - +1.7 695,090 + -3.0 695,090 + -1.0 695,091 - -0.9 695,094 - -0.3 695,122 + +1.1 695,123 - +1.9 695,125 + -0.4 695,200 - +0.4 695,212 + -0.8 695,213 - -1.2 695,249 + +1.4 695,251 + +1.0 695,251 + -1.3 695,252 - -0.9 695,258 + +0.3 695,266 + -0.9 695,497 + tag BNILDI_03560 0.50 +0.1 695,498 - tag BNILDI_03560 0.51 +1.8 695,498 - tag BNILDI_03560 0.51 -0.1 695,571 + tag BNILDI_03560 0.63 -1.9 695,833 - yiaC BNILDI_03565 0.14 -0.5 695,855 + yiaC BNILDI_03565 0.19 -0.5 695,856 - yiaC BNILDI_03565 0.19 -0.0 695,856 - yiaC BNILDI_03565 0.19 +0.8 695,902 + yiaC BNILDI_03565 0.29 -0.5 695,902 + yiaC BNILDI_03565 0.29 +1.9 695,902 + yiaC BNILDI_03565 0.29 -0.5 695,903 - yiaC BNILDI_03565 0.29 -2.2 695,968 - yiaC BNILDI_03565 0.44 -0.2 696,046 + yiaC BNILDI_03565 0.62 -0.4 696,046 + yiaC BNILDI_03565 0.62 +1.1 696,046 + yiaC BNILDI_03565 0.62 -0.8 696,046 + yiaC BNILDI_03565 0.62 -0.5 696,047 - yiaC BNILDI_03565 0.62 -0.9
Or see this region's nucleotide sequence