Strain Fitness in Escherichia coli ECOR38 around HEPCGN_06320

Experiment: RB68

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RB68
1,129,364	+		HEPCGN_06310	0.61	+0.5
1,129,365	-		HEPCGN_06310	0.61	-0.7
1,129,367	-		HEPCGN_06310	0.62	-0.2
1,129,367	-		HEPCGN_06310	0.62	+0.5
1,129,367	-		HEPCGN_06310	0.62	-0.4
1,129,371	+		HEPCGN_06310	0.62	+1.1
1,129,440	+		HEPCGN_06310	0.79	-1.0
1,129,492	+				+0.5
1,129,493	-				+0.1
1,129,539	-				-1.0
1,129,539	-				-0.5
1,130,291	+				-0.2
1,130,382	+				+0.1
1,130,826	+	istA	HEPCGN_06320	0.46	-0.6
1,130,826	+	istA	HEPCGN_06320	0.46	+0.0
1,130,827	-	istA	HEPCGN_06320	0.46	+1.3
1,130,827	-	istA	HEPCGN_06320	0.46	-0.4
1,130,869	+	istA	HEPCGN_06320	0.50	+0.6
1,130,980	+	istA	HEPCGN_06320	0.61	-1.1
1,130,980	+	istA	HEPCGN_06320	0.61	-0.5
1,130,981	-	istA	HEPCGN_06320	0.61	-0.7
1,130,986	+	istA	HEPCGN_06320	0.62	+1.3
1,131,157	-	istA	HEPCGN_06320	0.78	-0.2
1,131,189	+	istA	HEPCGN_06320	0.82	+0.1
1,131,190	-	istA	HEPCGN_06320	0.82	-1.2
1,131,445	-				-0.2
1,131,445	-				-0.1
1,131,513	-				-0.4
1,131,513	-				-0.2
1,131,513	-				+0.0
1,131,531	-				+0.1
1,131,554	-				+0.4
1,131,618	+				+0.1
1,131,620	+				-0.4
1,131,621	-				-1.5
1,131,679	-				-0.0
1,131,865	-				+0.5
1,132,023	+	ynfS	HEPCGN_06325	0.36	-0.4
1,132,031	-	ynfS	HEPCGN_06325	0.44	+1.3
1,132,127	-				+0.5
1,132,181	-	cspF	HEPCGN_06330	0.22	+1.3
1,132,288	-	cspF	HEPCGN_06330	0.72	-1.7