Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02600

Experiment: NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
2,718,554	-				-0.3
2,718,651	-				-0.1
2,718,651	-				-0.6
2,718,651	-				-1.6
2,718,651	-				-1.2
2,718,651	-				-1.4
2,718,651	-				-1.3
2,718,651	-				-0.7
2,718,651	-				+0.1
2,718,651	-				+0.7
2,718,651	-				+0.6
2,718,651	-				-0.1
2,718,651	-				-1.4
2,718,651	-				-2.3
2,718,651	-				+0.5
2,718,651	-				-1.5
2,718,653	-				-0.4
2,718,653	-				+0.3
2,718,653	-				-0.4
2,718,653	-				-2.0
2,718,653	-				-1.9
2,718,653	-				-1.4
2,718,653	-				+0.1
2,718,653	-				+0.1
2,718,653	-				-2.0
2,718,653	-				+0.4
2,718,653	-				-0.4
2,718,770	+				-0.4
2,718,791	+				+0.9
2,718,791	+				-1.3
2,718,848	+				-0.4
2,718,866	-				-0.8
2,718,878	-				-0.6
2,718,890	+				-0.9
2,718,949	-				+0.1
2,718,955	-				+0.1
2,718,974	+				-1.1
2,718,998	-				+1.1
2,719,003	-				-0.1
2,719,355	+				-1.6
2,719,355	+				+0.1
2,719,355	+				-0.3
2,719,355	+				-0.2
2,719,355	+				-1.3
2,719,355	+				-2.3
2,719,355	+				-1.9
2,719,355	+				-1.7
2,719,355	+				+1.7
2,719,355	+				+0.1
2,719,356	-				-0.5
2,719,356	-				+0.5
2,719,356	-				+0.1
2,719,356	-				-0.4
2,719,356	-				+0.6
2,719,356	-				-0.0
2,719,356	-				-0.9
2,719,371	-				+0.6
2,719,371	-				+1.7
2,719,598	+		MPMX19_02600	0.30	+0.2
2,719,598	+		MPMX19_02600	0.30	+1.1
2,719,598	+		MPMX19_02600	0.30	-1.2
2,719,598	+		MPMX19_02600	0.30	+0.5
2,719,598	+		MPMX19_02600	0.30	+1.0
2,719,598	+		MPMX19_02600	0.30	-0.3
2,719,598	+		MPMX19_02600	0.30	+1.7
2,719,598	+		MPMX19_02600	0.30	-0.7
2,719,598	+		MPMX19_02600	0.30	-0.1
2,719,598	+		MPMX19_02600	0.30	-0.3
2,719,598	+		MPMX19_02600	0.30	-0.1
2,719,598	+		MPMX19_02600	0.30	+2.4
2,719,598	+		MPMX19_02600	0.30	+0.5
2,719,598	+		MPMX19_02600	0.30	+0.1
2,719,598	+		MPMX19_02600	0.30	-0.3
2,719,598	+		MPMX19_02600	0.30	+0.1
2,719,598	+		MPMX19_02600	0.30	-1.7
2,719,598	+		MPMX19_02600	0.30	-0.3
2,719,598	+		MPMX19_02600	0.30	+0.3
2,719,598	+		MPMX19_02600	0.30	-1.9
2,719,598	+		MPMX19_02600	0.30	+0.3
2,719,598	+		MPMX19_02600	0.30	-0.8
2,719,598	+		MPMX19_02600	0.30	-0.4
2,719,598	+		MPMX19_02600	0.30	-1.6
2,719,598	+		MPMX19_02600	0.30	-0.3
2,719,598	+		MPMX19_02600	0.30	-0.3
2,719,598	+		MPMX19_02600	0.30	+1.1
2,719,598	+		MPMX19_02600	0.30	-0.3
2,719,598	+		MPMX19_02600	0.30	-0.5
2,719,598	+		MPMX19_02600	0.30	+0.7
2,719,598	+		MPMX19_02600	0.30	+0.7
2,719,598	+		MPMX19_02600	0.30	+1.0
2,719,598	+		MPMX19_02600	0.30	+0.3
2,719,598	+		MPMX19_02600	0.30	-0.0
2,719,598	+		MPMX19_02600	0.30	-1.6
2,719,598	+		MPMX19_02600	0.30	-0.3
2,719,598	+		MPMX19_02600	0.30	+1.2
2,719,598	+		MPMX19_02600	0.30	-0.1
2,719,598	+		MPMX19_02600	0.30	+0.9
2,719,599	-		MPMX19_02600	0.30	+0.1
2,719,599	-		MPMX19_02600	0.30	+1.1
2,719,599	-		MPMX19_02600	0.30	+0.2
2,719,599	-		MPMX19_02600	0.30	-0.6
2,719,599	-		MPMX19_02600	0.30	-0.6
2,719,599	-		MPMX19_02600	0.30	-1.4
2,719,599	-		MPMX19_02600	0.30	-1.1
2,719,599	-		MPMX19_02600	0.30	-1.1
2,719,599	-		MPMX19_02600	0.30	+1.0
2,719,599	-		MPMX19_02600	0.30	+0.7
2,719,599	-		MPMX19_02600	0.30	-1.1
2,719,599	-		MPMX19_02600	0.30	-0.1
2,719,599	-		MPMX19_02600	0.30	+1.0
2,719,599	-		MPMX19_02600	0.30	+0.1
2,719,599	-		MPMX19_02600	0.30	-0.5
2,719,599	-		MPMX19_02600	0.30	+0.7
2,719,599	-		MPMX19_02600	0.30	-1.6
2,719,599	-		MPMX19_02600	0.30	+0.1
2,719,599	-		MPMX19_02600	0.30	-2.4
2,719,599	-		MPMX19_02600	0.30	+0.3
2,719,599	-		MPMX19_02600	0.30	+0.5
2,719,599	-		MPMX19_02600	0.30	-0.5
2,719,952	+				+0.9
2,719,952	+				-0.3
2,719,952	+				-0.9
2,719,952	+				-1.7
2,719,952	+				+0.3
2,719,952	+				-0.1
2,719,952	+				+0.9
2,719,952	+				-0.6
2,719,952	+				-0.0
2,719,952	+				-0.6
2,719,952	+				-0.5
2,719,952	+				-0.9
2,719,952	+				+0.6
2,719,952	+				-1.5
2,719,952	+				-1.9
2,719,952	+				+0.9
2,719,952	+				-0.4
2,719,952	+				+1.2
2,719,952	+				-1.7
2,719,952	+				-0.8
2,719,952	+				-0.1
2,719,952	+				-0.1
2,719,952	+				+0.1
2,719,953	-				+1.7
2,719,953	-				-2.0
2,719,953	-				+0.4
2,719,953	-				-1.4
2,719,953	-				+0.3
2,719,953	-				-0.9
2,719,953	-				+1.0
2,719,953	-				-0.3
2,719,953	-				-1.4
2,719,953	-				+1.1
2,719,953	-				-2.9
2,719,953	-				-0.8
2,719,953	-				-1.4
2,719,953	-				-0.4
2,719,953	-				-0.9
2,719,953	-				-0.7
2,719,953	-				-1.2
2,719,953	-				-1.0
2,719,953	-				+0.7
2,719,953	-				-1.1
2,719,953	-				+0.5
2,719,953	-				-0.7
2,719,953	-				-0.3
2,719,953	-				+0.0
2,719,953	-				+0.1
2,720,059	+				-0.8
2,720,059	+				+0.1
2,720,059	+				-1.7
2,720,059	+				+1.5
2,720,059	+				-0.6
2,720,059	+				+1.5
2,720,059	+				+1.1
2,720,059	+				+0.3
2,720,059	+				-1.4
2,720,059	+				-0.5
2,720,059	+				-0.4
2,720,059	+				-0.6
2,720,059	+				+0.7
2,720,060	-				-0.9
2,720,060	-				-0.1
2,720,060	-				-0.3
2,720,060	-				+1.2
2,720,060	-				+0.4
2,720,060	-				-0.2
2,720,060	-				-0.7
2,720,060	-				+0.3
2,720,060	-				-0.2
2,720,060	-				-0.5
2,720,060	-				+0.3
2,720,060	-				-0.7
2,720,060	-				-1.6
2,720,060	-				+1.5
2,720,060	-				+0.1
2,720,060	-				-0.0
2,720,060	-				+1.0
2,720,060	-				-1.4
2,720,060	-				+0.5
2,720,120	+				-0.7
2,720,120	+				-0.9
2,720,121	-				-1.1
2,720,121	-				-0.4
2,720,121	-				-0.6
2,720,121	-				-1.4
2,720,149	-				+1.2
2,720,149	-				-2.0
2,720,149	-				-0.8
2,720,149	-				-0.6
2,720,466	+		MPMX19_02601	0.30	+0.7
2,720,466	+		MPMX19_02601	0.30	-0.4
2,720,466	+		MPMX19_02601	0.30	-0.9
2,720,466	+		MPMX19_02601	0.30	-0.5
2,720,466	+		MPMX19_02601	0.30	-0.4
2,720,466	+		MPMX19_02601	0.30	+1.4
2,720,466	+		MPMX19_02601	0.30	+0.1
2,720,466	+		MPMX19_02601	0.30	+1.7
2,720,466	+		MPMX19_02601	0.30	-1.4
2,720,467	-		MPMX19_02601	0.30	-0.5
2,720,467	-		MPMX19_02601	0.30	-0.9
2,720,467	-		MPMX19_02601	0.30	+0.6
2,720,467	-		MPMX19_02601	0.30	-0.6
2,720,592	+		MPMX19_02601	0.42	-1.9
2,720,592	+		MPMX19_02601	0.42	+0.1
2,720,592	+		MPMX19_02601	0.42	+0.6
2,720,593	-		MPMX19_02601	0.42	+0.3
2,720,608	-		MPMX19_02601	0.44	-1.1