Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02401

Experiment: NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
2,522,951	+		MPMX19_02399	0.23	+0.8
2,522,951	+		MPMX19_02399	0.23	-0.6
2,522,951	+		MPMX19_02399	0.23	+0.3
2,522,951	+		MPMX19_02399	0.23	+1.5
2,522,951	+		MPMX19_02399	0.23	+1.6
2,522,951	+		MPMX19_02399	0.23	+0.7
2,522,951	+		MPMX19_02399	0.23	-0.1
2,522,951	+		MPMX19_02399	0.23	-1.0
2,522,951	+		MPMX19_02399	0.23	+0.5
2,522,951	+		MPMX19_02399	0.23	+0.0
2,522,952	-		MPMX19_02399	0.23	+0.9
2,522,952	-		MPMX19_02399	0.23	+0.7
2,522,952	-		MPMX19_02399	0.23	+0.9
2,522,952	-		MPMX19_02399	0.23	+0.0
2,522,952	-		MPMX19_02399	0.23	-0.7
2,522,952	-		MPMX19_02399	0.23	-0.6
2,522,952	-		MPMX19_02399	0.23	+0.0
2,522,952	-		MPMX19_02399	0.23	+0.0
2,522,952	-		MPMX19_02399	0.23	-2.0
2,522,952	-		MPMX19_02399	0.23	+0.1
2,522,972	+		MPMX19_02399	0.26	-1.9
2,522,972	+		MPMX19_02399	0.26	+0.4
2,522,972	+		MPMX19_02399	0.26	-0.7
2,522,972	+		MPMX19_02399	0.26	+0.6
2,522,972	+		MPMX19_02399	0.26	-0.5
2,522,972	+		MPMX19_02399	0.26	+0.5
2,522,972	+		MPMX19_02399	0.26	-0.6
2,522,972	+		MPMX19_02399	0.26	-0.0
2,522,972	+		MPMX19_02399	0.26	-0.0
2,522,972	+		MPMX19_02399	0.26	+0.4
2,522,972	+		MPMX19_02399	0.26	+0.1
2,522,972	+		MPMX19_02399	0.26	+1.3
2,522,972	+		MPMX19_02399	0.26	-1.1
2,522,972	+		MPMX19_02399	0.26	-0.9
2,522,972	+		MPMX19_02399	0.26	+1.6
2,522,972	+		MPMX19_02399	0.26	-0.6
2,522,972	+		MPMX19_02399	0.26	+0.3
2,522,972	+		MPMX19_02399	0.26	+0.7
2,522,972	+		MPMX19_02399	0.26	+0.2
2,522,972	+		MPMX19_02399	0.26	-1.6
2,522,972	+		MPMX19_02399	0.26	-0.1
2,522,972	+		MPMX19_02399	0.26	-0.9
2,522,972	+		MPMX19_02399	0.26	+0.7
2,522,972	+		MPMX19_02399	0.26	-0.3
2,522,972	+		MPMX19_02399	0.26	-0.7
2,522,972	+		MPMX19_02399	0.26	-0.2
2,522,972	+		MPMX19_02399	0.26	-2.3
2,522,972	+		MPMX19_02399	0.26	-0.0
2,522,972	+		MPMX19_02399	0.26	-1.7
2,522,972	+		MPMX19_02399	0.26	+1.0
2,522,972	+		MPMX19_02399	0.26	-3.1
2,522,972	+		MPMX19_02399	0.26	-1.9
2,522,972	+		MPMX19_02399	0.26	+1.0
2,522,972	+		MPMX19_02399	0.26	-0.1
2,522,972	+		MPMX19_02399	0.26	+1.4
2,522,972	+		MPMX19_02399	0.26	+0.1
2,522,972	+		MPMX19_02399	0.26	+0.1
2,522,973	-		MPMX19_02399	0.26	-0.3
2,522,973	-		MPMX19_02399	0.26	-0.2
2,522,973	-		MPMX19_02399	0.26	-1.8
2,522,973	-		MPMX19_02399	0.26	+0.1
2,522,973	-		MPMX19_02399	0.26	-0.6
2,522,973	-		MPMX19_02399	0.26	+0.5
2,522,973	-		MPMX19_02399	0.26	+0.6
2,522,973	-		MPMX19_02399	0.26	-0.6
2,522,973	-		MPMX19_02399	0.26	-1.3
2,522,973	-		MPMX19_02399	0.26	+0.0
2,522,973	-		MPMX19_02399	0.26	-1.1
2,522,973	-		MPMX19_02399	0.26	-1.1
2,522,973	-		MPMX19_02399	0.26	-0.0
2,522,973	-		MPMX19_02399	0.26	+0.1
2,522,973	-		MPMX19_02399	0.26	+0.1
2,522,973	-		MPMX19_02399	0.26	-0.5
2,522,973	-		MPMX19_02399	0.26	-1.7
2,522,973	-		MPMX19_02399	0.26	+0.5
2,522,973	-		MPMX19_02399	0.26	-0.4
2,522,973	-		MPMX19_02399	0.26	-0.6
2,522,973	-		MPMX19_02399	0.26	-1.7
2,522,973	-		MPMX19_02399	0.26	-2.9
2,522,973	-		MPMX19_02399	0.26	+0.1
2,522,973	-		MPMX19_02399	0.26	-1.1
2,522,973	-		MPMX19_02399	0.26	-0.3
2,522,973	-		MPMX19_02399	0.26	-1.3
2,522,973	-		MPMX19_02399	0.26	+0.7
2,522,973	-		MPMX19_02399	0.26	-0.1
2,522,973	-		MPMX19_02399	0.26	-0.9
2,522,973	-		MPMX19_02399	0.26	-0.8
2,522,973	-		MPMX19_02399	0.26	+0.7
2,522,973	-		MPMX19_02399	0.26	+0.6
2,522,973	-		MPMX19_02399	0.26	-1.2
2,522,973	-		MPMX19_02399	0.26	-1.0
2,522,973	-		MPMX19_02399	0.26	+0.7
2,522,973	-		MPMX19_02399	0.26	+0.2
2,522,973	-		MPMX19_02399	0.26	-0.7
2,522,973	-		MPMX19_02399	0.26	-0.3
2,522,973	-		MPMX19_02399	0.26	-2.1
2,522,973	-		MPMX19_02399	0.26	-1.1
2,522,973	-		MPMX19_02399	0.26	-0.8
2,522,973	-		MPMX19_02399	0.26	+1.3
2,522,973	-		MPMX19_02399	0.26	-1.3
2,522,973	-		MPMX19_02399	0.26	+0.1
2,523,164	+		MPMX19_02399	0.50	-0.1
2,523,164	+		MPMX19_02399	0.50	-0.7
2,523,164	+		MPMX19_02399	0.50	-1.2
2,523,164	+		MPMX19_02399	0.50	-1.1
2,523,164	+		MPMX19_02399	0.50	+0.7
2,523,164	+		MPMX19_02399	0.50	-1.5
2,523,164	+		MPMX19_02399	0.50	-0.5
2,523,164	+		MPMX19_02399	0.50	+0.1
2,523,164	+		MPMX19_02399	0.50	-0.1
2,523,164	+		MPMX19_02399	0.50	-2.1
2,523,164	+		MPMX19_02399	0.50	-0.4
2,523,164	+		MPMX19_02399	0.50	-1.4
2,523,164	+		MPMX19_02399	0.50	+0.0
2,523,164	+		MPMX19_02399	0.50	-0.1
2,523,164	+		MPMX19_02399	0.50	-0.8
2,523,165	-		MPMX19_02399	0.50	+1.1
2,523,165	-		MPMX19_02399	0.50	-0.5
2,523,165	-		MPMX19_02399	0.50	+0.6
2,523,165	-		MPMX19_02399	0.50	-0.7
2,523,165	-		MPMX19_02399	0.50	-1.7
2,523,165	-		MPMX19_02399	0.50	-0.4
2,523,165	-		MPMX19_02399	0.50	-1.9
2,523,165	-		MPMX19_02399	0.50	+0.3
2,523,165	-		MPMX19_02399	0.50	-1.3
2,523,165	-		MPMX19_02399	0.50	-0.9
2,523,165	-		MPMX19_02399	0.50	-0.7
2,523,191	+		MPMX19_02399	0.53	+0.3
2,523,191	+		MPMX19_02399	0.53	+0.3
2,523,191	+		MPMX19_02399	0.53	+0.2
2,523,191	+		MPMX19_02399	0.53	-0.9
2,523,191	+		MPMX19_02399	0.53	-0.3
2,523,191	+		MPMX19_02399	0.53	-0.1
2,523,192	-		MPMX19_02399	0.53	-0.3
2,523,192	-		MPMX19_02399	0.53	+1.9
2,523,263	+		MPMX19_02399	0.62	-0.7
2,523,263	+		MPMX19_02399	0.62	+1.1
2,523,263	+		MPMX19_02399	0.62	-0.4
2,523,263	+		MPMX19_02399	0.62	-0.5
2,523,263	+		MPMX19_02399	0.62	-1.4
2,523,264	-		MPMX19_02399	0.62	-0.9
2,523,264	-		MPMX19_02399	0.62	-0.6
2,523,440	+		MPMX19_02399	0.84	+0.9
2,523,440	+		MPMX19_02399	0.84	+0.7
2,523,440	+		MPMX19_02399	0.84	+1.7
2,523,440	+		MPMX19_02399	0.84	+0.4
2,523,440	+		MPMX19_02399	0.84	+0.6
2,523,440	+		MPMX19_02399	0.84	-1.1
2,523,441	-		MPMX19_02399	0.84	+0.2
2,523,441	-		MPMX19_02399	0.84	-0.6
2,523,441	-		MPMX19_02399	0.84	+1.9
2,523,441	-		MPMX19_02399	0.84	-0.3
2,524,233	+		MPMX19_02401	0.22	-0.1
2,524,233	+		MPMX19_02401	0.22	+0.7
2,524,233	+		MPMX19_02401	0.22	+0.3
2,524,233	+		MPMX19_02401	0.22	+0.2
2,524,233	+		MPMX19_02401	0.22	-2.2
2,524,233	+		MPMX19_02401	0.22	+1.0
2,524,233	+		MPMX19_02401	0.22	+0.0
2,524,233	+		MPMX19_02401	0.22	-1.6
2,524,233	+		MPMX19_02401	0.22	-0.6
2,524,233	+		MPMX19_02401	0.22	-1.4
2,524,233	+		MPMX19_02401	0.22	+0.7
2,524,233	+		MPMX19_02401	0.22	-1.1
2,524,233	+		MPMX19_02401	0.22	-0.4
2,524,233	+		MPMX19_02401	0.22	-0.4
2,524,233	+		MPMX19_02401	0.22	+0.7
2,524,233	+		MPMX19_02401	0.22	+0.1
2,524,233	+		MPMX19_02401	0.22	+0.3
2,524,233	+		MPMX19_02401	0.22	+1.0
2,524,234	-		MPMX19_02401	0.22	-1.0
2,524,234	-		MPMX19_02401	0.22	-0.1
2,524,234	-		MPMX19_02401	0.22	-0.9
2,524,234	-		MPMX19_02401	0.22	+0.3
2,524,234	-		MPMX19_02401	0.22	+1.0
2,524,234	-		MPMX19_02401	0.22	+0.6
2,524,234	-		MPMX19_02401	0.22	+0.4
2,524,234	-		MPMX19_02401	0.22	-0.3
2,524,234	-		MPMX19_02401	0.22	-0.1
2,524,234	-		MPMX19_02401	0.22	-0.6
2,524,234	-		MPMX19_02401	0.22	+1.1
2,524,234	-		MPMX19_02401	0.22	-0.4
2,524,234	-		MPMX19_02401	0.22	-0.9
2,524,234	-		MPMX19_02401	0.22	-1.3
2,524,605	+		MPMX19_02401	0.46	-0.9
2,524,605	+		MPMX19_02401	0.46	+0.3
2,524,605	+		MPMX19_02401	0.46	-0.3
2,524,605	+		MPMX19_02401	0.46	+2.2
2,524,605	+		MPMX19_02401	0.46	-0.4
2,524,605	+		MPMX19_02401	0.46	+0.3
2,524,605	+		MPMX19_02401	0.46	+0.7
2,524,605	+		MPMX19_02401	0.46	-0.3
2,524,605	+		MPMX19_02401	0.46	-0.7
2,524,605	+		MPMX19_02401	0.46	+0.1
2,524,606	-		MPMX19_02401	0.46	+1.1
2,524,606	-		MPMX19_02401	0.46	+0.6
2,524,606	-		MPMX19_02401	0.46	-0.4
2,524,606	-		MPMX19_02401	0.46	-0.1
2,524,606	-		MPMX19_02401	0.46	+0.4
2,524,606	-		MPMX19_02401	0.46	+0.3
2,524,606	-		MPMX19_02401	0.46	-1.7
2,524,606	-		MPMX19_02401	0.46	-0.7
2,524,722	+		MPMX19_02401	0.54	+1.2
2,524,723	-		MPMX19_02401	0.54	+0.9
2,524,730	-		MPMX19_02401	0.54	-1.1
2,525,298	+				-0.1
2,525,298	+				-0.5
2,525,298	+				+0.9
2,525,298	+				-1.9
2,525,298	+				-0.4
2,525,298	+				+0.3
2,525,298	+				+0.2
2,525,298	+				+1.3
2,525,298	+				+0.0
2,525,298	+				-0.2
2,525,298	+				-0.4
2,525,298	+				-0.7
2,525,298	+				-0.8
2,525,299	-				-2.4
2,525,299	-				+1.0
2,525,299	-				-0.5
2,525,299	-				+0.5
2,525,299	-				-0.4
2,525,299	-				-0.9
2,525,299	-				-1.3
2,525,299	-				-1.6
2,525,299	-				-0.7
2,525,299	-				+0.7
2,525,299	-				-1.6
2,525,299	-				+0.9
2,525,299	-				-0.7
2,525,299	-				-0.6
2,525,299	-				+0.4
2,525,299	-				-0.1
2,525,299	-				-0.9
2,525,299	-				+0.3
2,525,299	-				-1.2
2,525,299	-				-0.4
2,525,299	-				-0.4
2,525,299	-				-0.4
2,525,299	-				+0.3
2,525,299	-				+0.7
2,525,299	-				+0.4
2,525,299	-				-0.1
2,525,299	-				-0.3
2,525,299	-				-0.8
2,525,299	-				+0.8
2,525,299	-				-0.8
2,525,299	-				-0.3
2,525,299	-				-0.2
2,525,299	-				-2.1
2,525,353	-				-0.3
2,525,603	+		MPMX19_02402	0.48	-0.6
2,525,604	-		MPMX19_02402	0.49	-0.7
2,525,771	+				-0.0
2,525,771	+				+0.5
2,525,771	+				-0.1
2,525,771	+				+0.1
2,525,771	+				+0.1
2,525,771	+				-0.1
2,525,771	+				-0.4
2,525,771	+				+2.0
2,525,771	+				+0.6
2,525,771	+				+0.6
2,525,771	+				+0.7
2,525,771	+				-1.4
2,525,771	+				-0.5
2,525,771	+				-1.1
2,525,771	+				-0.1
2,525,771	+				+0.4
2,525,771	+				+0.0
2,525,772	-				-0.3
2,525,772	-				-0.3
2,525,772	-				+0.1
2,525,772	-				-0.4
2,525,772	-				+1.0
2,525,772	-				-2.4
2,525,772	-				-0.2
2,525,772	-				-0.7
2,525,772	-				+0.7
2,525,772	-				-0.6
2,525,772	-				+1.4
2,525,850	-		MPMX19_02403	0.11	-2.0
2,525,926	+		MPMX19_02403	0.30	-0.1
2,525,927	-		MPMX19_02403	0.30	-1.0
2,525,927	-		MPMX19_02403	0.30	-0.9
2,525,927	-		MPMX19_02403	0.30	+0.4
2,525,974	+		MPMX19_02403	0.42	-2.0
2,525,974	+		MPMX19_02403	0.42	+0.0
2,525,975	-		MPMX19_02403	0.42	-0.8
2,526,081	+		MPMX19_02403	0.68	+0.0
2,526,081	+		MPMX19_02403	0.68	-0.9
2,526,081	+		MPMX19_02403	0.68	-0.1
2,526,081	+		MPMX19_02403	0.68	-0.3
2,526,081	+		MPMX19_02403	0.68	-0.9
2,526,081	+		MPMX19_02403	0.68	+1.7
2,526,081	+		MPMX19_02403	0.68	-1.1
2,526,081	+		MPMX19_02403	0.68	+0.2
2,526,081	+		MPMX19_02403	0.68	+1.5
2,526,081	+		MPMX19_02403	0.68	-1.2
2,526,081	+		MPMX19_02403	0.68	-1.0
2,526,082	-		MPMX19_02403	0.68	-0.9
2,526,082	-		MPMX19_02403	0.68	-0.1
2,526,082	-		MPMX19_02403	0.68	-1.7
2,526,136	+		MPMX19_02403	0.82	+0.4
2,526,136	+		MPMX19_02403	0.82	+0.7
2,526,136	+		MPMX19_02403	0.82	+1.0
2,526,136	+		MPMX19_02403	0.82	+0.4
2,526,136	+		MPMX19_02403	0.82	-0.4
2,526,137	-		MPMX19_02403	0.82	+1.1
2,526,137	-		MPMX19_02403	0.82	+0.3
2,526,137	-		MPMX19_02403	0.82	+1.7
2,526,137	-		MPMX19_02403	0.82	+0.2
2,526,137	-		MPMX19_02403	0.82	-0.3
2,526,137	-		MPMX19_02403	0.82	+0.6
2,526,137	-		MPMX19_02403	0.82	+0.4
2,526,137	-		MPMX19_02403	0.82	-1.6
2,526,288	+				-0.9
2,526,288	+				-1.3
2,526,288	+				+0.1
2,526,288	+				-0.4
2,526,288	+				-0.5
2,526,288	+				+1.0
2,526,288	+				+0.3
2,526,383	+				-1.9
2,526,383	+				-1.1
2,526,383	+				-0.1
2,526,383	+				-1.9
2,526,383	+				-0.0
2,526,383	+				-0.1
2,526,383	+				+0.6
2,526,383	+				+0.4
2,526,383	+				-0.6
2,526,384	-				-1.7
2,526,384	-				-2.7
2,526,384	-				-1.9
2,526,384	-				-0.9
2,526,384	-				-0.1
2,526,384	-				-0.7
2,526,384	-				-0.4
2,526,384	-				-2.3
2,526,384	-				-0.6
2,526,384	-				-0.0
2,526,384	-				-1.2
2,526,384	-				+1.0
2,526,384	-				-1.2
2,526,384	-				-0.5
2,526,384	-				-0.4
2,526,384	-				-0.4