Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02395

Experiment: NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
2,517,478	+		MPMX19_02394	0.41	-1.3
2,517,478	+		MPMX19_02394	0.41	-1.5
2,517,478	+		MPMX19_02394	0.41	+0.3
2,517,478	+		MPMX19_02394	0.41	+0.1
2,517,478	+		MPMX19_02394	0.41	+3.5
2,517,478	+		MPMX19_02394	0.41	-0.0
2,517,478	+		MPMX19_02394	0.41	+1.0
2,517,478	+		MPMX19_02394	0.41	+0.1
2,517,479	-		MPMX19_02394	0.41	+0.1
2,517,479	-		MPMX19_02394	0.41	-1.6
2,517,479	-		MPMX19_02394	0.41	+0.0
2,517,479	-		MPMX19_02394	0.41	+1.6
2,517,479	-		MPMX19_02394	0.41	+0.1
2,517,479	-		MPMX19_02394	0.41	+0.7
2,517,479	-		MPMX19_02394	0.41	-0.3
2,517,479	-		MPMX19_02394	0.41	-0.2
2,517,479	-		MPMX19_02394	0.41	+0.4
2,517,479	-		MPMX19_02394	0.41	-0.1
2,517,601	+		MPMX19_02394	0.52	-0.9
2,517,602	-		MPMX19_02394	0.52	+1.9
2,517,602	-		MPMX19_02394	0.52	+0.6
2,517,602	-		MPMX19_02394	0.52	-0.4
2,517,602	-		MPMX19_02394	0.52	-0.5
2,517,602	-		MPMX19_02394	0.52	+0.0
2,518,267	+				+0.5
2,518,268	-				-2.2
2,518,268	-				+1.1
2,518,268	-				+0.7
2,518,268	-				-2.5
2,518,268	-				-0.6
2,518,268	-				-1.6
2,518,278	+				-0.3
2,518,279	-				-0.3
2,518,279	-				-0.5
2,518,279	-				-1.9
2,518,279	-				+0.2
2,518,333	+				+1.1
2,518,333	+				-0.3
2,518,333	+				-0.1
2,518,333	+				-0.6
2,518,333	+				-0.9
2,518,333	+				+0.3
2,518,333	+				-0.4
2,518,334	-				+0.7
2,518,334	-				-1.7
2,518,334	-				-1.3
2,518,334	-				+0.8
2,518,334	-				-1.9
2,518,334	-				+0.3
2,518,334	-				-0.3
2,518,334	-				-0.3
2,518,334	-				+0.0
2,518,334	-				-0.3
2,518,334	-				-0.6
2,518,334	-				-0.4
2,518,335	+				-1.5
2,518,335	+				-0.1
2,518,336	-				-0.1
2,518,336	-				-0.1
2,518,336	-				-0.7
2,518,336	-				+2.3
2,518,336	-				-2.3
2,518,340	+				-0.1
2,518,340	+				-1.4
2,518,340	+				+0.1
2,518,341	-				+1.0
2,518,341	-				-0.2
2,518,341	-				-0.2
2,518,341	-				+0.7
2,518,542	+		MPMX19_02395	0.24	-0.1
2,518,542	+		MPMX19_02395	0.24	-0.3
2,518,542	+		MPMX19_02395	0.24	-0.1
2,518,542	+		MPMX19_02395	0.24	+0.9
2,518,542	+		MPMX19_02395	0.24	-0.5
2,518,542	+		MPMX19_02395	0.24	+1.0
2,518,542	+		MPMX19_02395	0.24	+0.3
2,518,542	+		MPMX19_02395	0.24	-0.3
2,518,542	+		MPMX19_02395	0.24	-0.1
2,518,542	+		MPMX19_02395	0.24	+0.3
2,518,542	+		MPMX19_02395	0.24	-0.5
2,518,542	+		MPMX19_02395	0.24	-1.4
2,518,542	+		MPMX19_02395	0.24	-1.1
2,518,542	+		MPMX19_02395	0.24	-1.1
2,518,542	+		MPMX19_02395	0.24	+0.2
2,518,543	-		MPMX19_02395	0.24	-1.6
2,518,543	-		MPMX19_02395	0.24	-0.5
2,518,543	-		MPMX19_02395	0.24	-0.7
2,518,543	-		MPMX19_02395	0.24	-1.3
2,518,543	-		MPMX19_02395	0.24	-0.3
2,518,543	-		MPMX19_02395	0.24	-0.8
2,518,543	-		MPMX19_02395	0.24	-1.4
2,518,543	-		MPMX19_02395	0.24	+2.7
2,518,543	-		MPMX19_02395	0.24	-1.7
2,518,543	-		MPMX19_02395	0.24	-0.7
2,518,543	-		MPMX19_02395	0.24	-1.9
2,518,684	+		MPMX19_02395	0.44	+0.4
2,518,684	+		MPMX19_02395	0.44	-0.5
2,518,684	+		MPMX19_02395	0.44	+0.1
2,518,684	+		MPMX19_02395	0.44	+0.4
2,518,685	-		MPMX19_02395	0.45	-1.5
2,518,806	+		MPMX19_02395	0.62	-0.1
2,518,806	+		MPMX19_02395	0.62	-1.0
2,518,806	+		MPMX19_02395	0.62	-1.1
2,518,806	+		MPMX19_02395	0.62	-2.3
2,518,806	+		MPMX19_02395	0.62	-0.1
2,518,807	-		MPMX19_02395	0.62	-1.3
2,518,807	-		MPMX19_02395	0.62	+0.6
2,519,227	+				-0.3
2,519,227	+				-0.1
2,519,295	+				-0.9
2,519,295	+				-0.4
2,519,297	+				+0.9
2,519,297	+				+0.7
2,519,297	+				-3.1
2,519,631	+				+1.1
2,519,631	+				-0.7
2,519,631	+				-0.2
2,519,631	+				-0.2
2,519,631	+				-1.0
2,519,631	+				-0.4
2,519,631	+				-2.0
2,519,631	+				-0.6
2,519,631	+				+0.7
2,519,631	+				-0.7
2,519,631	+				+0.7
2,519,631	+				-1.3
2,519,631	+				-0.1
2,519,631	+				+0.0
2,519,631	+				-1.4
2,519,631	+				-1.0
2,519,631	+				-0.3
2,519,631	+				+0.7
2,519,631	+				-0.6
2,519,631	+				-1.4
2,519,631	+				+0.5
2,519,631	+				-1.2
2,519,632	-				-0.5
2,519,632	-				-1.5
2,519,632	-				-0.9
2,519,632	-				-0.7
2,519,632	-				+0.1
2,519,632	-				-0.4
2,519,632	-				+0.5
2,519,632	-				-0.7
2,519,632	-				-0.4
2,519,632	-				+0.3
2,519,632	-				-1.5
2,519,632	-				+0.2
2,519,632	-				-1.1
2,519,632	-				+0.6
2,519,632	-				-0.5
2,519,632	-				-1.4
2,519,632	-				+1.1
2,519,632	-				-0.0
2,519,633	+				+0.7
2,519,633	+				-1.5
2,519,633	+				+0.2
2,519,633	+				-1.7
2,519,633	+				-0.1
2,519,633	+				+0.3
2,519,633	+				+0.5
2,519,633	+				+1.3
2,519,633	+				-0.8
2,519,633	+				-0.0
2,519,633	+				-0.6
2,519,633	+				-0.4
2,519,633	+				-0.1
2,519,633	+				+1.0
2,519,633	+				-0.7
2,519,633	+				-1.6
2,519,633	+				-0.3
2,519,633	+				+0.7
2,519,633	+				-0.2
2,519,633	+				-1.6
2,519,633	+				-0.3
2,519,633	+				-1.6
2,519,633	+				-0.7
2,519,633	+				+1.0
2,519,633	+				+0.1
2,519,633	+				-3.1
2,519,633	+				-0.6
2,519,633	+				-1.4
2,519,633	+				+0.4
2,519,633	+				+0.1
2,519,633	+				-0.6
2,519,634	-				-0.2
2,519,634	-				+0.7
2,519,634	-				-2.0
2,519,634	-				-0.3
2,519,634	-				-0.1
2,519,634	-				-0.3
2,519,634	-				-0.8
2,519,634	-				-0.0
2,519,634	-				+0.8
2,519,634	-				-0.9
2,519,634	-				-0.1
2,519,634	-				-1.3
2,519,634	-				+0.3
2,519,634	-				+0.4
2,519,634	-				+0.3
2,519,634	-				-0.3
2,519,634	-				+0.9
2,519,634	-				-1.7
2,519,634	-				-0.3
2,519,634	-				-1.2
2,519,634	-				+0.1
2,519,634	-				-2.3
2,519,634	-				+0.1
2,519,634	-				-0.1
2,519,634	-				-0.9
2,519,634	-				-0.5
2,519,634	-				+1.7
2,519,634	-				-0.7
2,519,634	-				+0.9
2,519,634	-				+1.0
2,519,634	-				+0.1
2,519,634	-				-0.1
2,519,634	-				-0.3
2,519,634	-				-0.4
2,519,915	+		MPMX19_02397	0.55	-1.9
2,519,915	+		MPMX19_02397	0.55	+1.0
2,519,915	+		MPMX19_02397	0.55	+0.1
2,519,916	-		MPMX19_02397	0.55	-0.6
2,519,916	-		MPMX19_02397	0.55	-1.6
2,519,916	-		MPMX19_02397	0.55	-0.6
2,519,960	+		MPMX19_02397	0.63	+0.7
2,519,960	+		MPMX19_02397	0.63	-1.1
2,519,960	+		MPMX19_02397	0.63	-0.6
2,519,961	-		MPMX19_02397	0.63	-0.7
2,519,961	-		MPMX19_02397	0.63	-0.8
2,519,961	-		MPMX19_02397	0.63	-0.9
2,519,961	-		MPMX19_02397	0.63	-1.6