Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02264

Experiment: NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
2,380,917	+		MPMX19_02262	0.71	-1.6
2,380,917	+		MPMX19_02262	0.71	+0.2
2,380,917	+		MPMX19_02262	0.71	-0.5
2,380,917	+		MPMX19_02262	0.71	+0.2
2,380,917	+		MPMX19_02262	0.71	+1.1
2,380,917	+		MPMX19_02262	0.71	-0.6
2,380,917	+		MPMX19_02262	0.71	-2.9
2,380,917	+		MPMX19_02262	0.71	-0.0
2,380,917	+		MPMX19_02262	0.71	-0.0
2,380,917	+		MPMX19_02262	0.71	-0.1
2,380,917	+		MPMX19_02262	0.71	-1.2
2,380,917	+		MPMX19_02262	0.71	-0.7
2,380,917	+		MPMX19_02262	0.71	+0.3
2,380,917	+		MPMX19_02262	0.71	+0.5
2,380,918	-		MPMX19_02262	0.71	+0.6
2,380,918	-		MPMX19_02262	0.71	+1.5
2,380,918	-		MPMX19_02262	0.71	+0.2
2,380,918	-		MPMX19_02262	0.71	+0.1
2,380,918	-		MPMX19_02262	0.71	-0.5
2,380,918	-		MPMX19_02262	0.71	+1.0
2,380,918	-		MPMX19_02262	0.71	+0.2
2,380,918	-		MPMX19_02262	0.71	+0.3
2,380,918	-		MPMX19_02262	0.71	-0.2
2,380,918	-		MPMX19_02262	0.71	-1.0
2,380,918	-		MPMX19_02262	0.71	-0.7
2,380,918	-		MPMX19_02262	0.71	+0.6
2,380,918	-		MPMX19_02262	0.71	-0.1
2,380,918	-		MPMX19_02262	0.71	-0.8
2,381,412	+				-0.3
2,381,412	+				-0.3
2,381,412	+				-0.7
2,381,412	+				+0.2
2,381,412	+				-1.5
2,381,412	+				+0.1
2,381,412	+				-0.0
2,381,412	+				+0.4
2,381,412	+				+0.4
2,381,412	+				-1.2
2,381,413	-				-0.3
2,381,413	-				+1.1
2,381,658	+		MPMX19_02263	0.49	-0.9
2,381,658	+		MPMX19_02263	0.49	-0.3
2,381,658	+		MPMX19_02263	0.49	-0.2
2,381,658	+		MPMX19_02263	0.49	+1.0
2,381,658	+		MPMX19_02263	0.49	-0.6
2,381,658	+		MPMX19_02263	0.49	+0.4
2,381,659	-		MPMX19_02263	0.50	-0.6
2,381,659	-		MPMX19_02263	0.50	-0.3
2,381,659	-		MPMX19_02263	0.50	-0.7
2,381,659	-		MPMX19_02263	0.50	-0.9
2,381,659	-		MPMX19_02263	0.50	-0.1
2,381,659	-		MPMX19_02263	0.50	+0.5
2,381,659	-		MPMX19_02263	0.50	+1.1
2,381,659	-		MPMX19_02263	0.50	+0.4
2,381,659	-		MPMX19_02263	0.50	+1.7
2,381,659	-		MPMX19_02263	0.50	-2.5
2,381,659	-		MPMX19_02263	0.50	-0.7
2,381,661	+		MPMX19_02263	0.50	-0.0
2,381,661	+		MPMX19_02263	0.50	-0.3
2,381,661	+		MPMX19_02263	0.50	-1.2
2,381,661	+		MPMX19_02263	0.50	-2.0
2,381,661	+		MPMX19_02263	0.50	-0.6
2,381,661	+		MPMX19_02263	0.50	+0.1
2,381,661	+		MPMX19_02263	0.50	+1.4
2,381,662	-		MPMX19_02263	0.51	-1.2
2,381,662	-		MPMX19_02263	0.51	-1.5
2,381,662	-		MPMX19_02263	0.51	-0.1
2,381,718	+		MPMX19_02263	0.67	-0.9
2,381,718	+		MPMX19_02263	0.67	+1.1
2,381,718	+		MPMX19_02263	0.67	+1.3
2,381,718	+		MPMX19_02263	0.67	-1.9
2,381,718	+		MPMX19_02263	0.67	-1.6
2,381,718	+		MPMX19_02263	0.67	-0.4
2,381,718	+		MPMX19_02263	0.67	-0.3
2,381,719	-		MPMX19_02263	0.67	-1.9
2,381,719	-		MPMX19_02263	0.67	+0.4
2,381,719	-		MPMX19_02263	0.67	+0.4
2,381,719	-		MPMX19_02263	0.67	-1.6
2,381,719	-		MPMX19_02263	0.67	+0.3
2,381,719	-		MPMX19_02263	0.67	+0.2
2,381,719	-		MPMX19_02263	0.67	+1.0
2,381,719	-		MPMX19_02263	0.67	+1.5
2,381,719	-		MPMX19_02263	0.67	-0.9
2,381,802	+				-0.5
2,381,802	+				-0.2
2,381,802	+				-0.3
2,381,802	+				-0.7
2,381,802	+				-2.3
2,381,803	-				-0.8
2,381,803	-				-0.0
2,381,803	-				+0.0
2,381,803	-				-0.7
2,381,803	-				-0.1
2,381,803	-				+0.9
2,381,803	-				+0.9
2,381,803	-				+1.2
2,381,803	-				-1.3
2,382,074	+		MPMX19_02264	0.59	-1.1
2,382,074	+		MPMX19_02264	0.59	-2.1
2,382,074	+		MPMX19_02264	0.59	-0.1
2,382,075	-		MPMX19_02264	0.60	+0.3
2,382,075	-		MPMX19_02264	0.60	-1.1
2,382,122	-		MPMX19_02264	0.71	+0.7
2,382,122	-		MPMX19_02264	0.71	-1.2
2,382,174	+		MPMX19_02264	0.84	+0.5
2,382,176	+		MPMX19_02264	0.84	-0.8
2,382,176	+		MPMX19_02264	0.84	+0.9
2,382,176	+		MPMX19_02264	0.84	-1.2
2,382,176	+		MPMX19_02264	0.84	+0.7
2,382,176	+		MPMX19_02264	0.84	-0.1
2,382,176	+		MPMX19_02264	0.84	+0.2
2,382,176	+		MPMX19_02264	0.84	+0.1
2,382,176	+		MPMX19_02264	0.84	+0.7
2,382,176	+		MPMX19_02264	0.84	-0.1
2,382,176	+		MPMX19_02264	0.84	-0.6
2,382,177	-		MPMX19_02264	0.84	-2.4
2,382,177	-		MPMX19_02264	0.84	-0.3
2,382,177	-		MPMX19_02264	0.84	+0.6
2,382,177	-		MPMX19_02264	0.84	+0.9
2,382,177	-		MPMX19_02264	0.84	+1.3
2,382,177	-		MPMX19_02264	0.84	-2.2
2,382,177	-		MPMX19_02264	0.84	-0.4
2,382,177	-		MPMX19_02264	0.84	-0.9
2,382,177	-		MPMX19_02264	0.84	-0.5
2,382,177	-		MPMX19_02264	0.84	-1.0
2,382,177	-		MPMX19_02264	0.84	-0.5
2,382,177	-		MPMX19_02264	0.84	-0.8
2,382,177	-		MPMX19_02264	0.84	-0.2
2,382,221	+				-1.8
2,382,221	+				+0.2
2,382,221	+				-2.3
2,382,221	+				-0.2
2,382,221	+				-1.8
2,382,221	+				-1.0
2,382,221	+				+0.6
2,382,221	+				+0.1
2,382,221	+				+0.4
2,382,221	+				-0.5
2,382,221	+				-0.5
2,382,222	-				-1.3
2,382,222	-				-1.2
2,382,222	-				-1.0
2,382,222	-				+1.7
2,382,222	-				-0.2
2,382,222	-				+0.0
2,382,222	-				-0.6
2,382,222	-				+0.4
2,382,222	-				+1.5
2,382,222	-				-0.5
2,382,222	-				+0.7
2,382,228	+				-1.8
2,382,228	+				-0.3
2,382,228	+				-0.9
2,382,228	+				-0.0
2,382,228	+				-0.7
2,382,228	+				-1.2
2,382,228	+				+0.6
2,382,228	+				-0.5
2,382,228	+				+2.0
2,382,228	+				+0.4
2,382,228	+				-0.9
2,382,228	+				+0.1
2,382,228	+				-1.5
2,382,228	+				+0.2
2,382,228	+				-2.3
2,382,228	+				-3.0
2,382,228	+				+0.9
2,382,228	+				-0.1
2,382,229	-				-0.6
2,382,229	-				-2.5
2,382,229	-				-0.5
2,382,229	-				-1.2
2,382,229	-				-0.4
2,382,229	-				+0.8
2,382,229	-				-1.1
2,382,229	-				+1.7
2,382,229	-				-0.3
2,382,229	-				-0.6
2,382,229	-				-0.9
2,382,229	-				+1.7
2,382,229	-				-0.5
2,382,229	-				+0.9
2,382,229	-				-0.7
2,382,229	-				-0.3
2,382,229	-				-0.3
2,382,229	-				+0.3
2,382,229	-				-0.4
2,382,229	-				-0.3
2,382,229	-				-1.5
2,382,234	+				-1.3
2,382,234	+				-1.3
2,382,234	+				+0.5
2,382,234	+				+0.5
2,382,234	+				-0.3
2,382,234	+				-1.1
2,382,234	+				-0.5
2,382,234	+				+0.7
2,382,234	+				+0.7
2,382,234	+				-0.1
2,382,235	-				-0.7
2,382,235	-				-0.3
2,382,235	-				-1.3
2,382,235	-				-0.4
2,382,235	-				-2.1
2,382,235	-				+0.5
2,382,235	-				-0.5
2,382,235	-				-0.5
2,382,235	-				-2.1
2,382,235	-				-0.3
2,382,235	-				-1.6
2,382,235	-				-0.1
2,382,235	-				+1.4
2,382,235	-				+0.4
2,382,252	+				-0.6
2,382,252	+				-1.4
2,382,252	+				-0.3
2,382,252	+				-0.3
2,382,252	+				-1.0
2,382,252	+				+1.1
2,382,252	+				+1.1
2,382,252	+				-0.7
2,382,252	+				+0.4
2,382,252	+				+0.7
2,382,252	+				-1.1
2,382,252	+				-0.0
2,382,252	+				+0.1
2,382,252	+				+0.1
2,382,252	+				-0.6
2,382,252	+				-2.0
2,382,252	+				-0.6
2,382,252	+				+1.7
2,382,252	+				-0.8
2,382,252	+				-2.1
2,382,252	+				-0.5
2,382,252	+				+0.1
2,382,252	+				-1.0
2,382,252	+				+0.4
2,382,252	+				+0.5
2,382,252	+				+0.7
2,382,253	-				+0.5
2,382,253	-				-0.9
2,382,253	-				-0.2
2,382,253	-				-1.7
2,382,253	-				-0.4
2,382,253	-				+0.1
2,382,253	-				-0.3
2,382,253	-				+1.0
2,382,253	-				+0.9
2,382,253	-				-1.4
2,382,253	-				+0.3
2,382,253	-				+0.5
2,382,253	-				+0.4
2,382,253	-				-0.0
2,382,253	-				-0.6
2,382,253	-				-1.5
2,382,253	-				-1.7
2,382,253	-				-1.1
2,382,253	-				-1.8
2,382,253	-				-0.6
2,382,253	-				-0.7
2,382,334	+				-1.3
2,382,334	+				+1.0
2,382,334	+				-1.3
2,382,334	+				+0.9
2,382,334	+				+0.5
2,382,334	+				-1.5
2,382,334	+				-0.3
2,382,334	+				-0.5
2,382,335	-				+0.4
2,382,335	-				-1.6
2,382,335	-				-0.9
2,382,335	-				-1.2
2,382,335	-				-1.3
2,382,335	-				+0.8
2,382,335	-				-2.7
2,382,362	+				-0.8
2,382,362	+				-0.3
2,382,362	+				-0.5
2,382,362	+				+1.4
2,382,362	+				+0.5
2,382,362	+				-0.6
2,382,362	+				-1.8
2,382,362	+				+0.7
2,382,362	+				+0.0
2,382,362	+				+1.7
2,382,363	-				-0.3
2,382,363	-				-0.5
2,382,363	-				-0.5
2,382,363	-				-0.6
2,382,363	-				-0.9
2,382,363	-				-0.9
2,382,363	-				-0.4
2,382,363	-				-1.6
2,382,363	-				-0.2
2,382,363	-				-0.3
2,382,363	-				-2.5
2,382,363	-				+0.4
2,382,363	-				-0.9
2,382,395	+				-0.5
2,382,396	-				-0.5
2,382,396	-				-1.4
2,382,396	-				+0.0
2,382,396	-				-0.0
2,382,396	-				-0.0
2,382,400	+				+0.6
2,382,400	+				+0.3
2,382,400	+				-1.2
2,382,400	+				-1.1
2,382,400	+				-0.6
2,382,400	+				-0.3
2,382,401	-				-1.0
2,382,401	-				+1.3
2,382,401	-				-0.8
2,382,401	-				-1.8
2,382,401	-				+0.8
2,382,401	-				+0.7
2,382,401	-				-0.0
2,382,401	-				-0.1
2,382,401	-				-0.8
2,382,408	+				-0.3
2,382,408	+				-1.5
2,382,409	-				+0.7
2,382,523	+				-1.6
2,382,523	+				-1.3
2,382,524	-				-0.4
2,382,564	-				-0.2
2,382,565	+				+0.4
2,382,566	-				-0.9
2,382,578	+				+0.7
2,382,578	+				-0.9
2,382,580	+				-0.4
2,382,632	-				+0.1
2,382,632	-				+0.3
2,383,119	-				+1.0
2,383,125	-				+0.9
2,383,125	-				-1.3
2,383,125	-				-0.9
2,383,170	+				-0.1
2,383,170	+				-1.1
2,383,170	+				+0.1
2,383,171	-				-1.5
2,383,171	-				-0.4
2,383,171	-				-0.4