Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02104

Experiment: NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
2,202,969	+				-1.1
2,202,995	+				+0.9
2,202,995	+				+0.0
2,202,995	+				+0.6
2,202,995	+				-0.0
2,202,995	+				-0.6
2,202,996	-				-0.3
2,202,996	-				+0.5
2,202,996	-				+1.3
2,202,996	-				+0.6
2,203,006	+				+0.6
2,203,006	+				+0.3
2,203,006	+				-0.9
2,203,006	+				-2.1
2,203,007	-				-1.3
2,203,007	-				+0.8
2,203,007	-				-1.6
2,203,007	-				-0.7
2,203,007	-				+0.3
2,203,017	+				-1.2
2,203,249	+		MPMX19_02105	0.30	-0.7
2,203,262	-		MPMX19_02105	0.33	+0.5
2,203,262	-		MPMX19_02105	0.33	+0.3
2,203,262	-		MPMX19_02105	0.33	+0.3
2,203,262	-		MPMX19_02105	0.33	+1.2
2,203,418	+		MPMX19_02105	0.73	+1.1
2,203,419	-		MPMX19_02105	0.73	+0.3
2,203,451	+		MPMX19_02105	0.81	-0.9
2,203,571	+				+0.7
2,203,571	+				+0.1
2,203,571	+				-1.1
2,203,571	+				-0.4
2,203,572	-				-2.2
2,203,572	-				+0.1
2,203,572	-				-2.0
2,203,572	-				+0.6
2,203,572	-				-1.4
2,203,625	+				+0.3
2,203,625	+				-0.2
2,203,625	+				+1.1
2,203,626	-				+0.3
2,203,626	-				-0.4
2,203,626	-				-0.8
2,203,643	+				-1.0
2,203,643	+				-0.5
2,203,644	-				+1.0
2,203,644	-				+0.6
2,203,644	-				+0.2
2,203,644	-				-1.4
2,203,662	+				-0.2
2,203,662	+				-0.4
2,203,662	+				+0.0
2,203,662	+				-1.6
2,203,662	+				-0.1
2,203,662	+				+0.6
2,203,662	+				-0.6
2,203,662	+				-0.1
2,203,662	+				-0.6
2,203,662	+				-0.2
2,203,662	+				-0.6
2,203,662	+				-0.7
2,203,662	+				-1.0
2,203,662	+				-0.4
2,203,662	+				-0.7
2,203,662	+				+0.2
2,203,662	+				-0.7
2,203,662	+				-1.2
2,203,662	+				+0.6
2,203,662	+				-0.4
2,203,662	+				-1.0
2,203,662	+				-1.7
2,203,662	+				-0.6
2,203,662	+				+0.2
2,203,662	+				-0.7
2,203,662	+				+0.1
2,203,662	+				-0.6
2,203,662	+				+0.0
2,203,662	+				-0.2
2,203,662	+				+0.1
2,203,662	+				-1.2
2,203,662	+				-0.1
2,203,662	+				+0.0
2,203,662	+				+0.0
2,203,662	+				-0.5
2,203,662	+				+0.6
2,203,662	+				-1.4
2,203,662	+				-0.2
2,203,662	+				+1.4
2,203,662	+				-1.9
2,203,662	+				-0.6
2,203,662	+				-1.1
2,203,662	+				-2.5
2,203,662	+				+0.0
2,203,662	+				+0.0
2,203,662	+				-0.5
2,203,662	+				+0.1
2,203,662	+				+0.0
2,203,662	+				-0.4
2,203,662	+				-1.0
2,203,662	+				+0.1
2,203,663	-				-2.0
2,203,663	-				+0.4
2,203,663	-				+0.2
2,203,663	-				-0.4
2,203,663	-				-1.0
2,203,663	-				-2.2
2,203,663	-				-0.7
2,203,663	-				-0.8
2,203,663	-				-1.9
2,203,663	-				+0.7
2,203,663	-				+0.3
2,203,663	-				-1.6
2,203,663	-				-0.7
2,203,663	-				-0.9
2,203,663	-				-1.3
2,203,663	-				-0.2
2,203,663	-				-0.5
2,203,663	-				+0.6
2,203,663	-				-1.0
2,203,663	-				-0.6
2,203,663	-				-0.6
2,203,663	-				-1.1
2,203,663	-				-0.9
2,203,663	-				+1.1
2,203,663	-				-1.5
2,203,663	-				+0.1
2,203,663	-				+0.0
2,203,663	-				-0.4
2,203,663	-				-0.2
2,203,663	-				-1.4
2,203,663	-				-0.9
2,203,663	-				+1.6
2,203,663	-				-0.5
2,203,663	-				-1.8
2,203,663	-				-0.8
2,203,663	-				-2.3
2,203,663	-				+0.7
2,203,663	-				-0.4
2,203,663	-				-0.4
2,203,663	-				-1.6
2,203,663	-				-0.5
2,203,663	-				+1.6
2,203,663	-				-1.6
2,203,663	-				-0.5
2,203,663	-				-0.4
2,203,663	-				-0.6
2,203,663	-				+0.8
2,203,663	-				+1.0
2,203,663	-				-1.6
2,203,663	-				+1.2
2,203,663	-				-1.0
2,203,663	-				-0.3
2,203,663	-				-0.9
2,203,663	-				-0.6
2,203,663	-				-1.6
2,203,663	-				-0.8
2,203,663	-				-0.6
2,203,663	-				-0.6
2,203,663	-				-0.2
2,203,664	+				+0.1
2,203,664	+				-0.2
2,203,664	+				-1.9
2,203,664	+				+0.0
2,203,664	+				-0.2
2,203,664	+				-0.4
2,203,664	+				+0.4
2,203,664	+				-0.5
2,203,664	+				-1.2
2,203,664	+				+0.9
2,203,664	+				+0.0
2,203,664	+				+0.8
2,203,664	+				-1.0
2,203,664	+				-2.5
2,203,664	+				-0.8
2,203,664	+				-1.9
2,203,664	+				+0.0
2,203,664	+				-0.4
2,203,664	+				-0.3
2,203,664	+				+0.4
2,203,664	+				+1.6
2,203,664	+				+1.4
2,203,664	+				+1.2
2,203,664	+				+0.1
2,203,664	+				-0.9
2,203,664	+				-0.5
2,203,664	+				-0.9
2,203,664	+				+0.1
2,203,664	+				-1.1
2,203,664	+				+1.6
2,203,664	+				+0.2
2,203,664	+				-0.6
2,203,664	+				+0.6
2,203,664	+				-0.1
2,203,664	+				+0.1
2,203,664	+				-0.7
2,203,664	+				-0.3
2,203,664	+				-0.7
2,203,664	+				-2.9
2,203,664	+				+1.6
2,203,664	+				+0.3
2,203,664	+				-0.4
2,203,665	-				+1.3
2,203,665	-				+0.0
2,203,665	-				+1.1
2,203,665	-				-0.3
2,203,665	-				-1.1
2,203,665	-				-1.4
2,203,665	-				+0.6
2,203,665	-				+0.6
2,203,665	-				+0.3
2,203,665	-				-0.3
2,203,665	-				-0.2
2,203,665	-				+0.7
2,203,665	-				-1.3
2,203,665	-				+0.6
2,203,665	-				-0.8
2,203,665	-				+0.5
2,203,665	-				-0.7
2,203,665	-				-0.4
2,203,665	-				-0.3
2,203,665	-				+0.4
2,203,665	-				-0.6
2,203,665	-				-1.9
2,203,665	-				-0.7
2,203,665	-				+1.1
2,203,665	-				-0.1
2,203,665	-				-0.4
2,203,665	-				+0.0
2,203,665	-				-0.3
2,203,665	-				-0.9
2,203,665	-				-0.3
2,203,665	-				-0.7
2,203,665	-				+0.5
2,203,665	-				-0.4
2,203,665	-				-1.4
2,203,665	-				+1.6
2,203,665	-				-1.0
2,203,665	-				-0.5
2,203,665	-				+0.6
2,203,665	-				+0.4
2,203,665	-				-0.2
2,203,665	-				-0.6
2,203,745	+		MPMX19_02106	0.21	-0.6
2,203,745	+		MPMX19_02106	0.21	-0.5
2,203,745	+		MPMX19_02106	0.21	-0.1
2,203,745	+		MPMX19_02106	0.21	-0.7
2,203,745	+		MPMX19_02106	0.21	-0.4
2,203,745	+		MPMX19_02106	0.21	-0.2
2,203,745	+		MPMX19_02106	0.21	-1.6
2,203,745	+		MPMX19_02106	0.21	-0.3
2,203,745	+		MPMX19_02106	0.21	+0.7
2,203,745	+		MPMX19_02106	0.21	-1.1
2,203,746	-		MPMX19_02106	0.21	-1.4
2,203,746	-		MPMX19_02106	0.21	+0.6
2,203,746	-		MPMX19_02106	0.21	-0.1
2,203,746	-		MPMX19_02106	0.21	+0.5
2,203,746	-		MPMX19_02106	0.21	+0.1
2,203,746	-		MPMX19_02106	0.21	-0.9
2,203,746	-		MPMX19_02106	0.21	-1.0
2,203,746	-		MPMX19_02106	0.21	+0.4
2,203,746	-		MPMX19_02106	0.21	-1.9
2,203,746	-		MPMX19_02106	0.21	-1.3