Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02095

Experiment: NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
2,191,853	+		MPMX19_02093	0.54	-0.1
2,191,853	+		MPMX19_02093	0.54	-2.7
2,191,853	+		MPMX19_02093	0.54	-0.7
2,191,853	+		MPMX19_02093	0.54	-0.5
2,191,853	+		MPMX19_02093	0.54	+0.2
2,191,853	+		MPMX19_02093	0.54	+1.3
2,191,853	+		MPMX19_02093	0.54	+1.2
2,191,853	+		MPMX19_02093	0.54	+1.1
2,191,853	+		MPMX19_02093	0.54	+0.7
2,191,853	+		MPMX19_02093	0.54	-0.3
2,191,853	+		MPMX19_02093	0.54	+1.4
2,191,853	+		MPMX19_02093	0.54	-0.5
2,191,854	-		MPMX19_02093	0.54	-2.4
2,191,854	-		MPMX19_02093	0.54	-0.4
2,191,854	-		MPMX19_02093	0.54	-0.4
2,191,854	-		MPMX19_02093	0.54	+0.0
2,191,854	-		MPMX19_02093	0.54	-0.6
2,191,854	-		MPMX19_02093	0.54	-1.4
2,191,854	-		MPMX19_02093	0.54	-0.4
2,191,914	-		MPMX19_02093	0.61	-0.3
2,191,914	-		MPMX19_02093	0.61	-0.2
2,191,994	+		MPMX19_02093	0.71	+0.9
2,191,994	+		MPMX19_02093	0.71	+0.5
2,191,994	+		MPMX19_02093	0.71	-0.3
2,191,994	+		MPMX19_02093	0.71	-0.1
2,191,994	+		MPMX19_02093	0.71	-0.4
2,191,994	+		MPMX19_02093	0.71	-0.6
2,191,994	+		MPMX19_02093	0.71	-1.9
2,191,994	+		MPMX19_02093	0.71	+0.1
2,191,994	+		MPMX19_02093	0.71	-1.7
2,191,994	+		MPMX19_02093	0.71	-1.0
2,191,994	+		MPMX19_02093	0.71	+0.5
2,191,994	+		MPMX19_02093	0.71	-0.4
2,191,994	+		MPMX19_02093	0.71	+0.6
2,191,994	+		MPMX19_02093	0.71	-0.9
2,191,994	+		MPMX19_02093	0.71	-0.9
2,191,994	+		MPMX19_02093	0.71	-0.3
2,191,995	-		MPMX19_02093	0.71	-1.0
2,191,995	-		MPMX19_02093	0.71	-0.9
2,191,995	-		MPMX19_02093	0.71	-0.4
2,191,995	-		MPMX19_02093	0.71	+0.2
2,191,995	-		MPMX19_02093	0.71	+0.0
2,191,995	-		MPMX19_02093	0.71	-2.0
2,191,995	-		MPMX19_02093	0.71	-0.9
2,191,995	-		MPMX19_02093	0.71	-1.2
2,191,995	-		MPMX19_02093	0.71	+1.4
2,191,995	-		MPMX19_02093	0.71	+1.6
2,191,995	-		MPMX19_02093	0.71	-2.1
2,191,995	-		MPMX19_02093	0.71	-0.5
2,192,003	+		MPMX19_02093	0.72	+0.1
2,192,003	+		MPMX19_02093	0.72	-0.3
2,192,004	-		MPMX19_02093	0.72	+0.9
2,192,004	-		MPMX19_02093	0.72	+0.4
2,192,004	-		MPMX19_02093	0.72	-0.2
2,192,004	-		MPMX19_02093	0.72	-0.1
2,192,171	+				-0.6
2,192,171	+				-0.4
2,192,171	+				-2.0
2,192,171	+				-1.6
2,192,171	+				-0.3
2,192,171	+				-0.1
2,192,171	+				-0.9
2,192,171	+				-1.2
2,192,172	-				+0.0
2,192,172	-				-0.4
2,192,172	-				-0.3
2,192,172	-				+1.2
2,192,172	-				-0.2
2,192,172	-				-0.4
2,192,172	-				-0.7
2,192,172	-				-0.2
2,192,236	+				-1.2
2,192,237	-				-0.4
2,192,440	+				+0.6
2,192,441	-				+0.2
2,192,519	+				-1.1
2,192,520	-				+0.7
2,192,634	+		MPMX19_02094	0.34	-0.6
2,192,640	+		MPMX19_02094	0.36	-0.1
2,192,640	+		MPMX19_02094	0.36	-0.1
2,192,640	+		MPMX19_02094	0.36	-0.7
2,192,640	+		MPMX19_02094	0.36	-0.9
2,192,667	+		MPMX19_02094	0.48	+0.6
2,192,667	+		MPMX19_02094	0.48	+0.7
2,192,667	+		MPMX19_02094	0.48	+0.4
2,192,668	-		MPMX19_02094	0.49	+0.6
2,192,668	-		MPMX19_02094	0.49	-1.2
2,192,703	+		MPMX19_02094	0.64	+1.8
2,192,704	-		MPMX19_02094	0.65	-0.4
2,192,704	-		MPMX19_02094	0.65	-0.6
2,192,704	-		MPMX19_02094	0.65	+1.0
2,192,714	+		MPMX19_02094	0.69	-1.9
2,192,714	+		MPMX19_02094	0.69	+0.3
2,192,837	+		MPMX19_02095	0.13	-0.6
2,192,837	+		MPMX19_02095	0.13	-0.9
2,192,838	-		MPMX19_02095	0.13	-0.6
2,192,838	-		MPMX19_02095	0.13	-1.3
2,192,987	+		MPMX19_02095	0.47	+0.3
2,192,987	+		MPMX19_02095	0.47	-0.8
2,192,988	-		MPMX19_02095	0.47	+0.8
2,193,060	-		MPMX19_02095	0.63	+0.2
2,193,060	-		MPMX19_02095	0.63	-0.2
2,193,225	+				-1.0
2,193,225	+				-0.3
2,193,225	+				+0.2
2,193,225	+				-2.4
2,193,226	-				-0.9
2,193,226	-				+0.4
2,193,265	+				-0.9
2,193,265	+				+0.4
2,193,266	-				-0.7
2,193,266	-				-0.4
2,193,266	-				-0.5
2,193,266	-				+0.3
2,193,308	+				+1.7
2,193,704	+		MPMX19_02096	0.59	+0.4
2,193,704	+		MPMX19_02096	0.59	+0.6
2,193,704	+		MPMX19_02096	0.59	-1.1
2,193,704	+		MPMX19_02096	0.59	-1.2
2,193,704	+		MPMX19_02096	0.59	-1.4
2,193,704	+		MPMX19_02096	0.59	-0.6
2,193,704	+		MPMX19_02096	0.59	+0.0
2,193,704	+		MPMX19_02096	0.59	+0.1
2,193,704	+		MPMX19_02096	0.59	-0.4
2,193,704	+		MPMX19_02096	0.59	-0.3
2,193,704	+		MPMX19_02096	0.59	+1.4
2,193,704	+		MPMX19_02096	0.59	-1.0
2,193,704	+		MPMX19_02096	0.59	-0.8
2,193,705	-		MPMX19_02096	0.60	+0.9
2,193,705	-		MPMX19_02096	0.60	-1.1
2,193,705	-		MPMX19_02096	0.60	+0.1
2,193,705	-		MPMX19_02096	0.60	-0.4
2,193,705	-		MPMX19_02096	0.60	+0.0
2,193,705	-		MPMX19_02096	0.60	-1.1
2,193,705	-		MPMX19_02096	0.60	-0.4
2,193,705	-		MPMX19_02096	0.60	-0.4
2,193,705	-		MPMX19_02096	0.60	+0.4
2,193,705	-		MPMX19_02096	0.60	-0.9
2,193,705	-		MPMX19_02096	0.60	+0.3
2,193,705	-		MPMX19_02096	0.60	-0.1
2,193,705	-		MPMX19_02096	0.60	-1.0
2,193,705	-		MPMX19_02096	0.60	-1.4
2,193,705	-		MPMX19_02096	0.60	-0.6
2,193,711	+		MPMX19_02096	0.61	-0.6
2,193,711	+		MPMX19_02096	0.61	-1.2
2,193,712	-		MPMX19_02096	0.61	-0.4
2,193,781	+		MPMX19_02096	0.74	-0.8
2,193,781	+		MPMX19_02096	0.74	+1.9
2,193,781	+		MPMX19_02096	0.74	+0.5
2,193,781	+		MPMX19_02096	0.74	+0.9
2,193,781	+		MPMX19_02096	0.74	-1.1
2,193,781	+		MPMX19_02096	0.74	-1.0
2,193,781	+		MPMX19_02096	0.74	-0.4
2,193,782	-		MPMX19_02096	0.74	-0.7
2,193,782	-		MPMX19_02096	0.74	+0.1
2,193,858	+		MPMX19_02096	0.88	-1.4
2,193,858	+		MPMX19_02096	0.88	+0.9
2,193,858	+		MPMX19_02096	0.88	-0.1
2,193,858	+		MPMX19_02096	0.88	-0.9
2,193,858	+		MPMX19_02096	0.88	+0.1
2,193,859	-		MPMX19_02096	0.88	+0.0
2,193,859	-		MPMX19_02096	0.88	-1.2
2,193,859	-		MPMX19_02096	0.88	-0.7
2,193,859	-		MPMX19_02096	0.88	-1.0
2,193,859	-		MPMX19_02096	0.88	+0.3
2,193,859	-		MPMX19_02096	0.88	+0.4
2,193,859	-		MPMX19_02096	0.88	-2.1
2,193,859	-		MPMX19_02096	0.88	-0.6
2,193,921	+				-1.7
2,193,921	+				+0.8
2,193,922	-				-0.4
2,193,922	-				-1.2
2,193,951	+				-1.6
2,193,951	+				-0.3
2,193,951	+				-0.7
2,193,952	-				+0.8
2,193,952	-				+1.4
2,193,952	-				+0.0
2,193,952	-				+0.4
2,193,952	-				-0.1
2,193,952	-				+0.6
2,193,952	-				-0.1
2,193,969	-				+0.0
2,193,969	-				-1.6
2,193,969	-				+1.2
2,194,080	-				-1.6
2,194,080	-				+1.2