Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01067

Experiment: NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
1,104,399	+				+0.6
1,104,399	+				-0.7
1,104,399	+				+0.4
1,104,453	-				-0.8
1,104,453	-				-0.1
1,104,509	+				-0.2
1,104,509	+				-2.2
1,104,509	+				+0.5
1,104,509	+				-2.0
1,104,509	+				+0.1
1,104,509	+				-1.2
1,104,509	+				+0.1
1,104,509	+				+0.2
1,104,509	+				-1.4
1,104,509	+				+0.2
1,104,509	+				-0.7
1,104,509	+				+0.2
1,104,509	+				+1.7
1,104,509	+				-1.4
1,104,509	+				-1.1
1,104,509	+				-0.1
1,104,509	+				-0.4
1,104,509	+				+0.0
1,104,509	+				+0.6
1,104,509	+				-2.3
1,104,509	+				-0.1
1,104,509	+				-0.5
1,104,509	+				+1.9
1,104,509	+				-2.1
1,104,509	+				-0.0
1,104,510	-				-0.6
1,104,510	-				-1.6
1,104,510	-				-0.3
1,104,510	-				+2.1
1,104,510	-				-1.1
1,104,510	-				-1.4
1,104,510	-				-0.6
1,104,510	-				+0.4
1,104,510	-				+0.0
1,104,510	-				+1.0
1,104,510	-				-0.7
1,104,510	-				+1.0
1,104,510	-				+1.0
1,104,510	-				-1.8
1,104,510	-				-1.6
1,104,510	-				+2.2
1,104,510	-				-0.5
1,104,510	-				-0.2
1,104,510	-				+0.4
1,104,510	-				-0.4
1,104,510	-				-0.2
1,104,510	-				+0.6
1,104,510	-				+1.4
1,104,510	-				-0.9
1,104,511	+				-0.3
1,104,511	+				+1.4
1,104,511	+				+0.2
1,104,511	+				-0.7
1,104,511	+				-0.3
1,104,511	+				-0.7
1,104,511	+				-0.9
1,104,511	+				-0.1
1,104,512	-				-0.5
1,104,512	-				+0.7
1,104,512	-				-2.4
1,104,512	-				+0.9
1,104,512	-				+0.4
1,104,512	-				-0.6
1,104,512	-				-1.1
1,104,512	-				-1.6
1,104,512	-				+0.0
1,104,512	-				-0.1
1,104,683	+		MPMX19_01065	0.38	-0.3
1,104,683	+		MPMX19_01065	0.38	-0.3
1,104,683	+		MPMX19_01065	0.38	-0.3
1,104,683	+		MPMX19_01065	0.38	-0.1
1,104,683	+		MPMX19_01065	0.38	+0.0
1,104,683	+		MPMX19_01065	0.38	-0.1
1,104,683	+		MPMX19_01065	0.38	-0.7
1,104,683	+		MPMX19_01065	0.38	-0.7
1,104,683	+		MPMX19_01065	0.38	+0.2
1,104,683	+		MPMX19_01065	0.38	+0.6
1,104,683	+		MPMX19_01065	0.38	+1.4
1,104,683	+		MPMX19_01065	0.38	+0.1
1,104,684	-		MPMX19_01065	0.38	-1.4
1,104,684	-		MPMX19_01065	0.38	-0.9
1,104,684	-		MPMX19_01065	0.38	-0.7
1,104,684	-		MPMX19_01065	0.38	-0.6
1,104,684	-		MPMX19_01065	0.38	-1.0
1,104,684	-		MPMX19_01065	0.38	+0.2
1,104,779	+		MPMX19_01065	0.63	+0.7
1,104,779	+		MPMX19_01065	0.63	-0.7
1,104,779	+		MPMX19_01065	0.63	-0.0
1,104,779	+		MPMX19_01065	0.63	+1.4
1,104,779	+		MPMX19_01065	0.63	+0.1
1,104,779	+		MPMX19_01065	0.63	-0.7
1,104,779	+		MPMX19_01065	0.63	-0.9
1,104,780	-		MPMX19_01065	0.63	-1.9
1,104,780	-		MPMX19_01065	0.63	-2.6
1,104,780	-		MPMX19_01065	0.63	+0.3
1,104,780	-		MPMX19_01065	0.63	+0.1
1,104,780	-		MPMX19_01065	0.63	-0.6
1,104,780	-		MPMX19_01065	0.63	+0.1
1,104,780	-		MPMX19_01065	0.63	-0.7
1,104,780	-		MPMX19_01065	0.63	-0.4
1,104,802	+		MPMX19_01065	0.69	+0.0
1,104,802	+		MPMX19_01065	0.69	-1.7
1,104,802	+		MPMX19_01065	0.69	-0.1
1,104,802	+		MPMX19_01065	0.69	-0.3
1,104,802	+		MPMX19_01065	0.69	+0.1
1,104,802	+		MPMX19_01065	0.69	+0.9
1,104,802	+		MPMX19_01065	0.69	-0.5
1,104,802	+		MPMX19_01065	0.69	+0.0
1,104,802	+		MPMX19_01065	0.69	-0.6
1,104,802	+		MPMX19_01065	0.69	+0.1
1,104,802	+		MPMX19_01065	0.69	+0.6
1,104,802	+		MPMX19_01065	0.69	+0.2
1,104,802	+		MPMX19_01065	0.69	-0.3
1,104,802	+		MPMX19_01065	0.69	-0.2
1,104,802	+		MPMX19_01065	0.69	+0.4
1,104,802	+		MPMX19_01065	0.69	+0.6
1,104,802	+		MPMX19_01065	0.69	-0.1
1,104,803	-		MPMX19_01065	0.69	-0.6
1,104,803	-		MPMX19_01065	0.69	+1.6
1,104,803	-		MPMX19_01065	0.69	-0.7
1,104,803	-		MPMX19_01065	0.69	-0.6
1,104,803	-		MPMX19_01065	0.69	+1.0
1,104,803	-		MPMX19_01065	0.69	-1.7
1,104,803	-		MPMX19_01065	0.69	-1.0
1,104,803	-		MPMX19_01065	0.69	+0.1
1,104,803	-		MPMX19_01065	0.69	-0.2
1,104,803	-		MPMX19_01065	0.69	-0.0
1,104,803	-		MPMX19_01065	0.69	+0.4
1,104,803	-		MPMX19_01065	0.69	-0.3
1,104,803	-		MPMX19_01065	0.69	+0.0
1,104,803	-		MPMX19_01065	0.69	+0.9
1,104,803	-		MPMX19_01065	0.69	+0.4
1,104,803	-		MPMX19_01065	0.69	-1.1
1,104,803	-		MPMX19_01065	0.69	+0.0
1,104,917	+				-0.8
1,104,960	+				+0.4
1,104,983	+				+1.2
1,104,983	+				+0.4
1,104,983	+				-0.2
1,104,983	+				-1.7
1,104,983	+				+2.0
1,104,983	+				-1.1
1,104,983	+				+1.8
1,104,983	+				-0.8
1,104,983	+				-1.1
1,104,983	+				-0.6
1,104,983	+				-0.8
1,104,983	+				-0.5
1,104,983	+				-0.4
1,104,983	+				-1.6
1,104,983	+				+0.3
1,104,984	-				+0.4
1,104,984	-				-0.3
1,104,984	-				-2.5
1,104,984	-				+0.4
1,104,984	-				+0.6
1,104,984	-				-0.1
1,104,984	-				-0.4
1,104,984	-				-0.0
1,104,984	-				-0.6
1,104,984	-				+0.4
1,104,984	-				-1.2
1,104,984	-				+0.5
1,104,984	-				+0.2
1,104,984	-				-0.4
1,104,984	-				+0.7
1,105,092	-		MPMX19_01066	0.51	-1.7
1,105,161	+				-0.3
1,105,161	+				-0.2
1,105,161	+				-1.0
1,105,161	+				-0.5
1,105,161	+				-0.6
1,105,162	-				-0.9
1,105,162	-				-1.1
1,105,162	-				-0.9
1,105,162	-				+0.7
1,105,162	-				+1.1
1,105,162	-				+0.4
1,105,162	-				+0.2
1,105,162	-				+0.2
1,105,162	-				-0.2
1,105,162	-				+0.4
1,105,247	+				-1.4
1,105,247	+				-0.3
1,105,247	+				-2.4
1,105,248	-				-0.1
1,105,248	-				+0.4
1,105,248	-				-0.1
1,105,248	-				-0.5
1,105,248	-				-0.5
1,105,248	-				-1.7
1,105,338	+				-0.9
1,105,338	+				-0.1
1,105,572	+		MPMX19_01067	0.47	-0.6
1,105,573	-		MPMX19_01067	0.47	-1.8
1,106,462	-		MPMX19_01068	0.80	+0.4
1,106,563	+				-0.1
1,106,563	+				-0.0
1,106,563	+				+0.6
1,106,563	+				+0.2
1,106,563	+				-1.5
1,106,563	+				-0.1
1,106,564	-				+0.3
1,106,564	-				+1.9
1,106,605	+				+0.9
1,106,605	+				+1.4
1,106,606	-				+0.1
1,106,606	-				+1.1
1,106,606	-				+0.8
1,106,606	-				-1.0
1,106,606	-				-0.4
1,106,606	-				-1.6
1,106,712	+				+0.6
1,106,712	+				-0.2
1,106,712	+				+0.5
1,106,712	+				-0.7
1,106,712	+				+0.3
1,106,712	+				+0.8
1,106,712	+				+0.7
1,106,712	+				-0.6
1,106,712	+				-0.9
1,106,712	+				-1.0
1,106,712	+				+0.2
1,106,712	+				-1.0
1,106,712	+				+0.4
1,106,712	+				-1.6
1,106,712	+				+0.8
1,106,712	+				-0.1
1,106,712	+				+2.4
1,106,712	+				-0.8
1,106,712	+				-0.4
1,106,712	+				+0.0
1,106,712	+				-1.4
1,106,712	+				-0.6
1,106,712	+				-0.4
1,106,712	+				-0.1
1,106,712	+				-1.1
1,106,712	+				-0.4
1,106,712	+				-1.0
1,106,712	+				-1.4
1,106,712	+				-1.1
1,106,712	+				-1.4
1,106,713	-				+0.6
1,106,713	-				+0.6
1,106,713	-				+0.4
1,106,713	-				+0.7
1,106,713	-				+0.1
1,106,713	-				-1.0
1,106,713	-				+0.9
1,106,713	-				-0.3
1,106,713	-				-0.1
1,106,713	-				-1.0
1,106,713	-				+0.9
1,106,713	-				-0.9
1,106,713	-				-0.8
1,106,713	-				+0.2
1,106,713	-				-0.5
1,106,713	-				+0.4
1,106,713	-				-0.2
1,106,713	-				-0.5
1,106,713	-				-0.5
1,106,713	-				-2.8
1,106,713	-				+1.1
1,106,713	-				-1.9
1,106,713	-				-0.0
1,106,713	-				-0.9
1,106,713	-				-0.3
1,106,716	+				+0.0
1,106,716	+				-0.4
1,106,716	+				+0.3
1,106,716	+				+0.4
1,106,716	+				+0.6
1,106,716	+				-1.7
1,106,716	+				-0.3
1,106,716	+				+0.6
1,106,716	+				-0.2
1,106,716	+				+1.1
1,106,716	+				+0.4
1,106,716	+				+0.2
1,106,716	+				+0.1
1,106,716	+				-0.4
1,106,716	+				+0.2
1,106,716	+				+1.3
1,106,716	+				-0.7
1,106,716	+				-0.7
1,106,716	+				-0.7
1,106,716	+				-1.8
1,106,716	+				-1.1
1,106,716	+				+0.7
1,106,716	+				+0.1
1,106,716	+				+0.5
1,106,716	+				+0.3
1,106,716	+				-0.0
1,106,716	+				-0.1
1,106,717	-				-0.6
1,106,717	-				+0.4
1,106,717	-				-1.6
1,106,717	-				-1.4
1,106,717	-				-0.3
1,106,717	-				-0.1
1,106,717	-				+0.6
1,106,717	-				+0.0
1,106,717	-				+0.2
1,106,717	-				+1.4
1,106,717	-				+0.4