Strain Fitness in Escherichia coli ECOR38 around HEPCGN_01540

Experiment: Phi92

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phi92
230,223	-	aroG	HEPCGN_01535	0.35	+0.6
230,246	+	aroG	HEPCGN_01535	0.38	-0.1
230,345	+	aroG	HEPCGN_01535	0.47	-0.1
230,345	+	aroG	HEPCGN_01535	0.47	-0.8
230,346	-	aroG	HEPCGN_01535	0.47	+2.7
230,429	+	aroG	HEPCGN_01535	0.55	-0.7
230,451	-	aroG	HEPCGN_01535	0.57	-0.2
230,568	-	aroG	HEPCGN_01535	0.68	-0.1
230,572	-	aroG	HEPCGN_01535	0.68	+1.9
230,657	+	aroG	HEPCGN_01535	0.77	-2.1
230,658	-	aroG	HEPCGN_01535	0.77	+0.3
230,658	-	aroG	HEPCGN_01535	0.77	-1.1
230,809	-				-1.3
230,864	-				-0.5
230,885	-				+0.9
230,885	-				-0.1
231,137	+				-1.3
231,243	-	gpmA	HEPCGN_01540	0.23	-1.6
231,259	+	gpmA	HEPCGN_01540	0.25	+0.9
231,657	-	gpmA	HEPCGN_01540	0.78	-1.4
231,696	+	gpmA	HEPCGN_01540	0.83	+0.6
231,746	+	gpmA	HEPCGN_01540	0.90	+0.3
231,810	+				+0.1
231,811	-				-0.9
231,822	+				-0.8
231,823	-				-0.7
231,824	+				-0.5
231,824	+				+0.7
231,824	+				-0.1
231,824	+				+1.0
231,824	+				-0.9
231,824	+				+0.3
231,825	-				+1.3
231,825	-				-0.4
231,825	-				+0.8
231,828	+				+0.4
231,829	-				+0.5
231,829	-				+0.0
231,856	+				+0.0
232,336	-	galM	HEPCGN_01545	0.30	+1.0
232,471	-	galM	HEPCGN_01545	0.43	+1.4
232,547	-	galM	HEPCGN_01545	0.50	-1.1
232,553	-	galM	HEPCGN_01545	0.51	-0.3
232,553	-	galM	HEPCGN_01545	0.51	+0.8
232,588	-	galM	HEPCGN_01545	0.54	-0.5
232,588	-	galM	HEPCGN_01545	0.54	-0.0
232,588	-	galM	HEPCGN_01545	0.54	-0.9
232,591	+	galM	HEPCGN_01545	0.54	+0.3
232,591	+	galM	HEPCGN_01545	0.54	-1.2
232,592	-	galM	HEPCGN_01545	0.54	-0.4
232,592	-	galM	HEPCGN_01545	0.54	+2.3
232,600	+	galM	HEPCGN_01545	0.55	+0.8
232,601	-	galM	HEPCGN_01545	0.55	+0.3
232,624	-	galM	HEPCGN_01545	0.58	+1.0
232,688	+	galM	HEPCGN_01545	0.64	-0.3
232,810	+	galM	HEPCGN_01545	0.75	-1.4
232,813	-	galM	HEPCGN_01545	0.76	-2.0