Experiment: M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF7052 and GFF7053 are separated by 134 nucleotides GFF7053 and GFF7054 are separated by 0 nucleotides GFF7054 and GFF7055 are separated by 82 nucleotides
GFF7052 - Uncharacterized MFS-type transporter, at 12,167 to 13,489
GFF7052
GFF7053 - Transcriptional regulator, LysR family, at 13,624 to 14,526
GFF7053
GFF7054 - Glutathione S-transferase domain protein, at 14,527 to 15,174
GFF7054
GFF7055 - hypothetical protein, at 15,257 to 16,135
GFF7055
Position (kb) 13
14
15 Strain fitness (log2 ratio) -2
-1
0
1 at 12.690 kb on + strand, within GFF7052 at 12.691 kb on - strand, within GFF7052 at 12.691 kb on - strand, within GFF7052 at 12.691 kb on - strand, within GFF7052 at 12.691 kb on - strand, within GFF7052 at 12.691 kb on - strand, within GFF7052 at 12.702 kb on + strand, within GFF7052 at 12.702 kb on + strand, within GFF7052 at 12.702 kb on + strand, within GFF7052 at 12.702 kb on + strand, within GFF7052 at 12.703 kb on - strand, within GFF7052 at 12.703 kb on - strand, within GFF7052 at 12.703 kb on - strand, within GFF7052 at 12.703 kb on - strand, within GFF7052 at 12.703 kb on - strand, within GFF7052 at 12.717 kb on + strand, within GFF7052 at 12.717 kb on + strand, within GFF7052 at 12.718 kb on - strand, within GFF7052 at 12.867 kb on + strand, within GFF7052 at 12.867 kb on + strand, within GFF7052 at 12.867 kb on + strand, within GFF7052 at 12.867 kb on + strand, within GFF7052 at 12.867 kb on + strand, within GFF7052 at 12.867 kb on + strand, within GFF7052 at 12.867 kb on + strand, within GFF7052 at 12.867 kb on + strand, within GFF7052 at 12.867 kb on + strand, within GFF7052 at 12.867 kb on + strand, within GFF7052 at 12.867 kb on + strand, within GFF7052 at 12.867 kb on + strand, within GFF7052 at 12.867 kb on + strand, within GFF7052 at 12.867 kb on + strand, within GFF7052 at 12.867 kb on + strand, within GFF7052 at 12.867 kb on + strand, within GFF7052 at 12.868 kb on - strand, within GFF7052 at 12.868 kb on - strand, within GFF7052 at 12.868 kb on - strand, within GFF7052 at 12.868 kb on - strand, within GFF7052 at 12.868 kb on - strand, within GFF7052 at 12.868 kb on - strand, within GFF7052 at 12.868 kb on - strand, within GFF7052 at 12.868 kb on - strand, within GFF7052 at 12.868 kb on - strand, within GFF7052 at 12.868 kb on - strand, within GFF7052 at 12.868 kb on - strand, within GFF7052 at 12.868 kb on - strand, within GFF7052 at 12.868 kb on - strand, within GFF7052 at 13.026 kb on + strand, within GFF7052 at 13.026 kb on + strand, within GFF7052 at 13.026 kb on + strand, within GFF7052 at 13.027 kb on - strand, within GFF7052 at 13.027 kb on - strand, within GFF7052 at 13.027 kb on - strand, within GFF7052 at 13.027 kb on - strand, within GFF7052 at 13.027 kb on - strand, within GFF7052 at 13.158 kb on + strand, within GFF7052 at 13.158 kb on + strand, within GFF7052 at 13.158 kb on + strand, within GFF7052 at 13.158 kb on + strand, within GFF7052 at 13.159 kb on - strand, within GFF7052 at 13.159 kb on - strand, within GFF7052 at 13.159 kb on - strand, within GFF7052 at 13.383 kb on + strand at 13.383 kb on + strand at 13.383 kb on + strand at 13.383 kb on + strand at 13.384 kb on - strand at 13.538 kb on + strand at 13.539 kb on - strand at 13.539 kb on - strand at 13.539 kb on - strand at 13.562 kb on + strand at 13.562 kb on + strand at 13.562 kb on + strand at 13.562 kb on + strand at 13.562 kb on + strand at 13.563 kb on - strand at 13.563 kb on - strand at 13.563 kb on - strand at 13.563 kb on - strand at 13.563 kb on - strand at 13.563 kb on - strand at 13.563 kb on - strand at 13.563 kb on - strand at 13.593 kb on - strand at 13.603 kb on + strand at 13.724 kb on - strand, within GFF7053 at 14.041 kb on + strand, within GFF7053 at 14.330 kb on - strand, within GFF7053 at 14.330 kb on - strand, within GFF7053 at 14.524 kb on + strand at 14.524 kb on + strand at 14.525 kb on - strand at 14.525 kb on - strand at 14.525 kb on - strand at 14.525 kb on - strand at 14.528 kb on + strand at 14.528 kb on + strand at 14.528 kb on + strand at 14.528 kb on + strand at 14.528 kb on + strand at 14.528 kb on + strand at 14.528 kb on + strand at 14.528 kb on + strand at 14.529 kb on - strand at 14.529 kb on - strand at 14.529 kb on - strand at 14.529 kb on - strand at 14.529 kb on - strand at 14.529 kb on - strand at 14.529 kb on - strand at 14.529 kb on - strand at 14.568 kb on - strand at 14.568 kb on - strand at 14.828 kb on + strand, within GFF7054 at 14.834 kb on + strand, within GFF7054 at 14.835 kb on - strand, within GFF7054 at 15.125 kb on + strand at 15.126 kb on - strand at 15.126 kb on - strand at 15.126 kb on - strand at 15.390 kb on - strand, within GFF7055
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL remove 12,690 + GFF7052 0.40 -1.4 12,691 - GFF7052 0.40 -0.5 12,691 - GFF7052 0.40 -1.6 12,691 - GFF7052 0.40 +0.6 12,691 - GFF7052 0.40 +0.7 12,691 - GFF7052 0.40 +0.6 12,702 + GFF7052 0.40 -1.1 12,702 + GFF7052 0.40 -1.0 12,702 + GFF7052 0.40 +0.2 12,702 + GFF7052 0.40 +0.6 12,703 - GFF7052 0.41 +1.4 12,703 - GFF7052 0.41 -1.0 12,703 - GFF7052 0.41 -1.2 12,703 - GFF7052 0.41 -1.2 12,703 - GFF7052 0.41 -0.1 12,717 + GFF7052 0.42 +0.1 12,717 + GFF7052 0.42 +0.6 12,718 - GFF7052 0.42 +0.6 12,867 + GFF7052 0.53 +0.6 12,867 + GFF7052 0.53 -0.0 12,867 + GFF7052 0.53 -0.1 12,867 + GFF7052 0.53 -0.0 12,867 + GFF7052 0.53 +1.1 12,867 + GFF7052 0.53 -0.5 12,867 + GFF7052 0.53 +1.1 12,867 + GFF7052 0.53 -1.0 12,867 + GFF7052 0.53 +0.5 12,867 + GFF7052 0.53 -1.0 12,867 + GFF7052 0.53 +0.8 12,867 + GFF7052 0.53 +0.3 12,867 + GFF7052 0.53 +0.5 12,867 + GFF7052 0.53 -0.1 12,867 + GFF7052 0.53 -0.9 12,867 + GFF7052 0.53 +0.3 12,868 - GFF7052 0.53 +1.1 12,868 - GFF7052 0.53 -0.8 12,868 - GFF7052 0.53 -2.1 12,868 - GFF7052 0.53 +0.2 12,868 - GFF7052 0.53 -0.8 12,868 - GFF7052 0.53 -0.4 12,868 - GFF7052 0.53 +1.6 12,868 - GFF7052 0.53 -0.7 12,868 - GFF7052 0.53 -0.4 12,868 - GFF7052 0.53 -1.0 12,868 - GFF7052 0.53 +0.4 12,868 - GFF7052 0.53 -0.4 12,868 - GFF7052 0.53 +1.0 13,026 + GFF7052 0.65 +0.4 13,026 + GFF7052 0.65 +0.7 13,026 + GFF7052 0.65 +0.3 13,027 - GFF7052 0.65 -0.0 13,027 - GFF7052 0.65 +0.4 13,027 - GFF7052 0.65 +0.6 13,027 - GFF7052 0.65 -0.0 13,027 - GFF7052 0.65 -1.1 13,158 + GFF7052 0.75 -1.3 13,158 + GFF7052 0.75 -0.0 13,158 + GFF7052 0.75 -1.1 13,158 + GFF7052 0.75 -0.0 13,159 - GFF7052 0.75 +1.0 13,159 - GFF7052 0.75 +0.8 13,159 - GFF7052 0.75 -0.3 13,383 + -0.4 13,383 + -0.2 13,383 + +0.1 13,383 + -0.7 13,384 - -0.6 13,538 + +0.4 13,539 - -0.2 13,539 - +0.6 13,539 - +1.2 13,562 + -0.8 13,562 + -0.3 13,562 + +0.2 13,562 + -1.1 13,562 + +1.0 13,563 - +0.8 13,563 - -0.6 13,563 - -1.8 13,563 - +0.2 13,563 - -0.3 13,563 - -0.1 13,563 - -0.2 13,563 - -1.4 13,593 - -0.5 13,603 + -0.1 13,724 - GFF7053 0.11 -1.7 14,041 + GFF7053 0.46 -1.2 14,330 - GFF7053 0.78 -0.4 14,330 - GFF7053 0.78 -0.8 14,524 + +0.8 14,524 + -0.0 14,525 - +0.6 14,525 - -1.6 14,525 - +0.8 14,525 - +0.2 14,528 + -0.4 14,528 + -0.5 14,528 + +0.0 14,528 + -0.8 14,528 + -0.5 14,528 + -0.8 14,528 + +0.5 14,528 + +0.6 14,529 - -0.9 14,529 - -0.4 14,529 - -1.0 14,529 - +0.0 14,529 - -0.4 14,529 - +0.2 14,529 - -0.0 14,529 - -0.4 14,568 - -0.3 14,568 - +1.0 14,828 + GFF7054 0.46 -2.1 14,834 + GFF7054 0.47 -0.5 14,835 - GFF7054 0.48 -0.3 15,125 + +0.1 15,126 - +0.3 15,126 - +1.0 15,126 - +0.2 15,390 - GFF7055 0.15 -0.3
Or see this region's nucleotide sequence