Strain Fitness in Variovorax sp. SCN45 around GFF7018

Experiment: M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
34,054	+		GFF7017	0.43	-0.2
34,210	+		GFF7017	0.52	+0.3
34,501	+		GFF7017	0.70	-0.1
34,543	+		GFF7017	0.73	+0.3
34,702	+		GFF7017	0.83	+0.5
34,702	+		GFF7017	0.83	-0.4
34,703	-		GFF7017	0.83	-1.1
34,703	-		GFF7017	0.83	-0.9
34,750	+		GFF7017	0.86	-1.0
34,751	-		GFF7017	0.86	-0.8
34,822	+				+0.2
34,966	+				+0.7
34,966	+				+0.1
34,966	+				-1.1
34,966	+				-0.2
34,967	-				-0.3
34,967	-				+0.2
34,967	-				-0.3
35,251	+		GFF7018	0.26	-1.5
35,252	-		GFF7018	0.27	-2.5
35,252	-		GFF7018	0.27	-1.0
35,714	-		GFF7018	0.73	-1.3
36,234	+		GFF7019	0.29	-0.4
36,235	-		GFF7019	0.29	-0.8
36,541	-		GFF7019	0.62	-0.9
36,541	-		GFF7019	0.62	-1.5
36,759	+		GFF7019	0.86	-0.3
36,759	+		GFF7019	0.86	-1.7
36,760	-		GFF7019	0.86	-0.8