Strain Fitness in Variovorax sp. SCN45 around GFF7011

Experiment: M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
25,785	+				-0.3
26,043	+				-0.0
26,043	+				+0.5
26,043	+				+0.3
26,044	-				-0.3
26,254	-				+0.3
26,389	-				-1.2
26,615	+				-0.0
26,679	-				-1.2
26,891	+		GFF7011	0.31	-1.7
26,892	-		GFF7011	0.31	-1.0
26,910	-		GFF7011	0.33	-1.0
27,609	+		GFF7012	0.13	-0.1
27,609	+		GFF7012	0.13	-0.4
27,650	-		GFF7012	0.19	-0.4
27,650	-		GFF7012	0.19	-0.0
27,650	-		GFF7012	0.19	-0.8
27,735	+		GFF7012	0.29	+0.3
27,894	+		GFF7012	0.50	+0.3
27,912	+		GFF7012	0.52	+2.1
28,255	-				-2.1
28,255	-				+1.0
28,346	+				-1.2
28,346	+				+0.5
28,347	-				-0.0
28,347	-				-0.2
28,370	+				-0.2
28,370	+				+0.2
28,395	-				-0.4