Strain Fitness in Variovorax sp. SCN45 around GFF6184

Experiment: M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
89,727	-				+0.1
89,727	-				-1.2
89,901	-		GFF6184	0.31	+0.4
90,045	-		GFF6184	0.56	-1.2
90,045	-		GFF6184	0.56	-1.3
90,045	-		GFF6184	0.56	-1.5
90,045	-		GFF6184	0.56	-1.1
90,259	-				+0.3
90,330	-				-0.8
90,330	-				-0.2
90,330	-				+1.1
90,330	-				-0.5
90,330	-				-0.0
90,330	-				-1.3
90,377	+				+0.1
90,377	+				-0.3
90,377	+				+0.1
90,378	-				-0.3
90,378	-				-0.2