Strain Fitness in Variovorax sp. SCN45 around GFF4317

Experiment: M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
237,615	+		GFF4316	0.60	-0.1
237,616	-		GFF4316	0.61	-1.1
237,810	+		GFF4316	0.71	-1.7
237,810	+		GFF4316	0.71	+0.3
237,810	+		GFF4316	0.71	+0.0
237,811	-		GFF4316	0.71	-0.1
238,080	+		GFF4316	0.86	-0.5
238,080	+		GFF4316	0.86	-0.2
238,081	-		GFF4316	0.86	+0.3
238,333	+				-0.3
238,786	+		GFF4317	0.52	+0.3
239,164	+				+0.6
239,453	-		GFF4318	0.18	+1.4
239,459	-		GFF4318	0.19	-0.4
239,459	-		GFF4318	0.19	+0.1
239,579	+		GFF4318	0.29	-1.6
239,593	+		GFF4318	0.30	+2.0
239,779	+		GFF4318	0.46	-0.3
239,779	+		GFF4318	0.46	+0.1
239,810	-		GFF4318	0.48	+0.6
239,977	+		GFF4318	0.62	+0.4
239,977	+		GFF4318	0.62	-0.5
240,001	+		GFF4318	0.64	+0.2