Experiment: M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4235 and GFF4236 are separated by 14 nucleotides GFF4236 and GFF4237 are separated by 42 nucleotides GFF4237 and GFF4238 are separated by 19 nucleotides
GFF4235 - Hydroxymethylpyrimidine ABC transporter, ATPase component, at 145,849 to 146,667
GFF4235
GFF4236 - Hydroxymethylpyrimidine ABC transporter, transmembrane component, at 146,682 to 147,584
GFF4236
GFF4237 - no description, at 147,627 to 148,724
GFF4237
GFF4238 - no description, at 148,744 to 149,880
GFF4238
Position (kb) 147
148
149 Strain fitness (log2 ratio) -2
-1
0
1 at 147.087 kb on + strand, within GFF4236 at 147.823 kb on - strand, within GFF4237 at 147.823 kb on - strand, within GFF4237 at 147.954 kb on + strand, within GFF4237 at 147.954 kb on + strand, within GFF4237 at 147.955 kb on - strand, within GFF4237 at 148.248 kb on + strand, within GFF4237 at 148.422 kb on + strand, within GFF4237 at 148.723 kb on - strand at 148.751 kb on + strand at 148.751 kb on + strand at 148.751 kb on + strand at 148.752 kb on - strand at 148.752 kb on - strand at 148.752 kb on - strand at 148.752 kb on - strand at 149.183 kb on - strand, within GFF4238 at 149.254 kb on + strand, within GFF4238 at 149.254 kb on + strand, within GFF4238 at 149.254 kb on + strand, within GFF4238 at 149.254 kb on + strand, within GFF4238 at 149.254 kb on + strand, within GFF4238 at 149.254 kb on + strand, within GFF4238 at 149.255 kb on - strand, within GFF4238 at 149.255 kb on - strand, within GFF4238 at 149.255 kb on - strand, within GFF4238 at 149.275 kb on + strand, within GFF4238 at 149.276 kb on - strand, within GFF4238 at 149.276 kb on - strand, within GFF4238 at 149.414 kb on - strand, within GFF4238 at 149.414 kb on - strand, within GFF4238 at 149.534 kb on - strand, within GFF4238
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL remove 147,087 + GFF4236 0.45 -0.1 147,823 - GFF4237 0.18 -0.9 147,823 - GFF4237 0.18 -0.4 147,954 + GFF4237 0.30 +0.8 147,954 + GFF4237 0.30 -1.2 147,955 - GFF4237 0.30 -0.2 148,248 + GFF4237 0.57 -0.6 148,422 + GFF4237 0.72 -0.4 148,723 - -1.5 148,751 + -1.0 148,751 + -0.1 148,751 + +1.1 148,752 - -1.4 148,752 - -0.8 148,752 - -0.0 148,752 - -0.3 149,183 - GFF4238 0.39 +0.4 149,254 + GFF4238 0.45 -0.5 149,254 + GFF4238 0.45 -0.7 149,254 + GFF4238 0.45 +0.5 149,254 + GFF4238 0.45 -0.7 149,254 + GFF4238 0.45 -2.2 149,254 + GFF4238 0.45 -1.5 149,255 - GFF4238 0.45 -0.2 149,255 - GFF4238 0.45 -0.0 149,255 - GFF4238 0.45 -0.1 149,275 + GFF4238 0.47 -1.0 149,276 - GFF4238 0.47 -0.5 149,276 - GFF4238 0.47 -0.6 149,414 - GFF4238 0.59 -0.4 149,414 - GFF4238 0.59 -0.0 149,534 - GFF4238 0.69 +0.7
Or see this region's nucleotide sequence