Strain Fitness in Variovorax sp. SCN45 around GFF4192

Experiment: M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
106,216	-		GFF4191	0.13	-0.8
106,386	+		GFF4191	0.31	-0.5
106,387	-		GFF4191	0.31	-1.3
106,444	-		GFF4191	0.37	+1.2
106,510	-		GFF4191	0.44	-1.0
106,621	+		GFF4191	0.55	-0.5
106,621	+		GFF4191	0.55	-0.8
106,621	+		GFF4191	0.55	-0.0
106,622	-		GFF4191	0.55	+0.7
106,803	+		GFF4191	0.74	+0.5
106,803	+		GFF4191	0.74	-0.7
106,980	+				-0.5
107,688	+		GFF4192	0.84	-1.0
107,761	-				-0.2
107,797	-				-0.8
107,885	-				+0.0
108,271	+		GFF4193	0.38	-1.5
108,272	-		GFF4193	0.38	-0.8
108,272	-		GFF4193	0.38	-1.5
108,427	+		GFF4193	0.51	+0.1
108,428	-		GFF4193	0.51	-0.3
108,796	+		GFF4193	0.83	-0.3