Strain Fitness in Variovorax sp. SCN45 around GFF3034

Experiment: M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
466,058	-		GFF3033	0.51	-0.1
466,431	+		GFF3033	0.72	+0.3
466,431	+		GFF3033	0.72	-1.9
466,431	+		GFF3033	0.72	-0.8
467,033	+				-1.5
467,034	-				-0.8
467,034	-				-0.1
467,034	-				+0.3
467,034	-				-1.3
467,229	-		GFF3034	0.81	-1.0
467,789	+		GFF3035	0.19	+0.7
467,789	+		GFF3035	0.19	-0.1
467,789	+		GFF3035	0.19	-0.1
467,789	+		GFF3035	0.19	-0.3
467,789	+		GFF3035	0.19	-0.4
467,789	+		GFF3035	0.19	-0.4
467,789	+		GFF3035	0.19	-0.3
467,790	-		GFF3035	0.19	-0.8
467,790	-		GFF3035	0.19	-0.6
467,790	-		GFF3035	0.19	+0.0
467,790	-		GFF3035	0.19	+0.3
467,790	-		GFF3035	0.19	-0.1
467,790	-		GFF3035	0.19	+0.6
467,790	-		GFF3035	0.19	+0.7
467,862	-		GFF3035	0.22	+0.8
467,963	+		GFF3035	0.27	-0.7
467,964	-		GFF3035	0.27	+0.9
468,122	+		GFF3035	0.34	+1.2
468,122	+		GFF3035	0.34	-0.8
468,123	-		GFF3035	0.34	-0.4
468,251	+		GFF3035	0.40	-0.6
468,263	+		GFF3035	0.40	-1.5