Experiment: M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2772 and GFF2773 are separated by 74 nucleotides GFF2773 and GFF2774 are separated by 78 nucleotides
GFF2772 - Site-specific tyrosine recombinase XerD, at 202,012 to 202,923
GFF2772
GFF2773 - BUG/TctC family periplasmic protein, at 202,998 to 203,972
GFF2773
GFF2774 - Auxin efflux carrier family protein, at 204,051 to 204,995
GFF2774
Position (kb) 202
203
204 Strain fitness (log2 ratio) -2
-1
0
1
2 at 202.073 kb on + strand at 202.073 kb on + strand at 202.073 kb on + strand at 202.073 kb on + strand at 202.073 kb on + strand at 202.073 kb on + strand at 202.074 kb on - strand at 202.074 kb on - strand at 202.074 kb on - strand at 202.074 kb on - strand at 202.074 kb on - strand at 202.074 kb on - strand at 202.074 kb on - strand at 202.331 kb on + strand, within GFF2772 at 202.478 kb on + strand, within GFF2772 at 202.479 kb on - strand, within GFF2772 at 202.479 kb on - strand, within GFF2772 at 202.479 kb on - strand, within GFF2772 at 202.661 kb on + strand, within GFF2772 at 202.661 kb on + strand, within GFF2772 at 202.661 kb on + strand, within GFF2772 at 202.661 kb on + strand, within GFF2772 at 202.662 kb on - strand, within GFF2772 at 202.662 kb on - strand, within GFF2772 at 202.733 kb on + strand, within GFF2772 at 202.733 kb on + strand, within GFF2772 at 202.733 kb on + strand, within GFF2772 at 202.733 kb on + strand, within GFF2772 at 202.733 kb on + strand, within GFF2772 at 202.733 kb on + strand, within GFF2772 at 202.733 kb on + strand, within GFF2772 at 202.733 kb on + strand, within GFF2772 at 202.733 kb on + strand, within GFF2772 at 202.734 kb on - strand, within GFF2772 at 202.734 kb on - strand, within GFF2772 at 202.734 kb on - strand, within GFF2772 at 202.734 kb on - strand, within GFF2772 at 202.734 kb on - strand, within GFF2772 at 202.734 kb on - strand, within GFF2772 at 202.734 kb on - strand, within GFF2772 at 202.734 kb on - strand, within GFF2772 at 202.935 kb on + strand at 202.936 kb on - strand at 203.038 kb on + strand at 203.038 kb on + strand at 203.039 kb on - strand at 203.039 kb on - strand at 203.047 kb on + strand at 203.048 kb on - strand at 203.048 kb on - strand at 203.216 kb on - strand, within GFF2773 at 203.218 kb on + strand, within GFF2773 at 203.218 kb on + strand, within GFF2773 at 203.218 kb on + strand, within GFF2773 at 203.218 kb on + strand, within GFF2773 at 203.218 kb on + strand, within GFF2773 at 203.219 kb on - strand, within GFF2773 at 203.219 kb on - strand, within GFF2773 at 203.219 kb on - strand, within GFF2773 at 203.219 kb on - strand, within GFF2773 at 203.458 kb on + strand, within GFF2773 at 203.458 kb on + strand, within GFF2773 at 203.458 kb on + strand, within GFF2773 at 203.458 kb on + strand, within GFF2773 at 203.458 kb on + strand, within GFF2773 at 203.458 kb on + strand, within GFF2773 at 203.458 kb on + strand, within GFF2773 at 203.458 kb on + strand, within GFF2773 at 203.458 kb on + strand, within GFF2773 at 203.458 kb on + strand, within GFF2773 at 203.459 kb on - strand, within GFF2773 at 203.459 kb on - strand, within GFF2773 at 203.459 kb on - strand, within GFF2773 at 203.459 kb on - strand, within GFF2773 at 203.506 kb on + strand, within GFF2773 at 203.507 kb on - strand, within GFF2773 at 203.512 kb on + strand, within GFF2773 at 203.512 kb on + strand, within GFF2773 at 203.512 kb on + strand, within GFF2773 at 203.512 kb on + strand, within GFF2773 at 203.512 kb on + strand, within GFF2773 at 203.512 kb on + strand, within GFF2773 at 203.512 kb on + strand, within GFF2773 at 203.513 kb on - strand, within GFF2773 at 203.513 kb on - strand, within GFF2773 at 203.513 kb on - strand, within GFF2773 at 203.513 kb on - strand, within GFF2773 at 203.513 kb on - strand, within GFF2773 at 203.513 kb on - strand, within GFF2773 at 203.554 kb on + strand, within GFF2773 at 203.554 kb on + strand, within GFF2773 at 203.554 kb on + strand, within GFF2773 at 203.554 kb on + strand, within GFF2773 at 203.555 kb on - strand, within GFF2773 at 203.555 kb on - strand, within GFF2773 at 203.555 kb on - strand, within GFF2773 at 203.555 kb on - strand, within GFF2773 at 203.711 kb on - strand, within GFF2773 at 203.894 kb on - strand at 203.920 kb on - strand at 204.024 kb on + strand at 204.057 kb on + strand at 204.058 kb on - strand at 204.096 kb on + strand at 204.096 kb on + strand at 204.096 kb on + strand at 204.097 kb on - strand at 204.097 kb on - strand at 204.097 kb on - strand at 204.097 kb on - strand at 204.097 kb on - strand at 204.097 kb on - strand at 204.204 kb on + strand, within GFF2774 at 204.204 kb on + strand, within GFF2774 at 204.204 kb on + strand, within GFF2774 at 204.207 kb on + strand, within GFF2774 at 204.207 kb on + strand, within GFF2774 at 204.208 kb on - strand, within GFF2774 at 204.327 kb on + strand, within GFF2774 at 204.328 kb on - strand, within GFF2774 at 204.328 kb on - strand, within GFF2774 at 204.882 kb on + strand, within GFF2774 at 204.882 kb on + strand, within GFF2774 at 204.882 kb on + strand, within GFF2774 at 204.882 kb on + strand, within GFF2774 at 204.882 kb on + strand, within GFF2774 at 204.883 kb on - strand, within GFF2774 at 204.883 kb on - strand, within GFF2774 at 204.883 kb on - strand, within GFF2774 at 204.883 kb on - strand, within GFF2774 at 204.883 kb on - strand, within GFF2774 at 204.906 kb on + strand at 204.906 kb on + strand at 204.907 kb on - strand at 204.907 kb on - strand at 204.907 kb on - strand at 204.907 kb on - strand at 204.907 kb on - strand at 204.907 kb on - strand at 204.907 kb on - strand at 204.907 kb on - strand at 204.918 kb on + strand at 204.918 kb on + strand at 204.918 kb on + strand at 204.918 kb on + strand at 204.918 kb on + strand at 204.918 kb on + strand at 204.918 kb on + strand at 204.918 kb on + strand at 204.918 kb on + strand at 204.918 kb on + strand at 204.918 kb on + strand at 204.918 kb on + strand at 204.918 kb on + strand at 204.918 kb on + strand at 204.918 kb on + strand at 204.918 kb on + strand at 204.918 kb on + strand at 204.918 kb on + strand at 204.919 kb on - strand at 204.919 kb on - strand at 204.919 kb on - strand at 204.919 kb on - strand at 204.919 kb on - strand at 204.919 kb on - strand at 204.919 kb on - strand at 204.919 kb on - strand at 204.919 kb on - strand at 204.919 kb on - strand at 204.919 kb on - strand at 204.919 kb on - strand at 204.919 kb on - strand at 204.919 kb on - strand at 204.919 kb on - strand at 204.919 kb on - strand at 204.919 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL remove 202,073 + -0.3 202,073 + -0.9 202,073 + -0.6 202,073 + +0.7 202,073 + -0.2 202,073 + -0.3 202,074 - -0.2 202,074 - +0.1 202,074 - -2.3 202,074 - +0.1 202,074 - -0.8 202,074 - +0.2 202,074 - -0.5 202,331 + GFF2772 0.35 -2.3 202,478 + GFF2772 0.51 +0.8 202,479 - GFF2772 0.51 -0.3 202,479 - GFF2772 0.51 -1.2 202,479 - GFF2772 0.51 +0.6 202,661 + GFF2772 0.71 +0.7 202,661 + GFF2772 0.71 -0.1 202,661 + GFF2772 0.71 +0.1 202,661 + GFF2772 0.71 -1.7 202,662 - GFF2772 0.71 -2.2 202,662 - GFF2772 0.71 -1.0 202,733 + GFF2772 0.79 -0.5 202,733 + GFF2772 0.79 -1.0 202,733 + GFF2772 0.79 +0.1 202,733 + GFF2772 0.79 +0.3 202,733 + GFF2772 0.79 -0.6 202,733 + GFF2772 0.79 +2.7 202,733 + GFF2772 0.79 -0.9 202,733 + GFF2772 0.79 -1.9 202,733 + GFF2772 0.79 -0.9 202,734 - GFF2772 0.79 +0.2 202,734 - GFF2772 0.79 -0.1 202,734 - GFF2772 0.79 +0.2 202,734 - GFF2772 0.79 -0.5 202,734 - GFF2772 0.79 -0.9 202,734 - GFF2772 0.79 -0.7 202,734 - GFF2772 0.79 +1.2 202,734 - GFF2772 0.79 +0.5 202,935 + +0.1 202,936 - -0.5 203,038 + +1.1 203,038 + -0.1 203,039 - -0.5 203,039 - -0.6 203,047 + -0.4 203,048 - -0.4 203,048 - -0.3 203,216 - GFF2773 0.22 +0.1 203,218 + GFF2773 0.23 +0.7 203,218 + GFF2773 0.23 +1.1 203,218 + GFF2773 0.23 -1.2 203,218 + GFF2773 0.23 +0.1 203,218 + GFF2773 0.23 -0.4 203,219 - GFF2773 0.23 -0.2 203,219 - GFF2773 0.23 +0.2 203,219 - GFF2773 0.23 -0.5 203,219 - GFF2773 0.23 -0.7 203,458 + GFF2773 0.47 -1.2 203,458 + GFF2773 0.47 +0.1 203,458 + GFF2773 0.47 +0.2 203,458 + GFF2773 0.47 +0.7 203,458 + GFF2773 0.47 -1.2 203,458 + GFF2773 0.47 -0.9 203,458 + GFF2773 0.47 -1.0 203,458 + GFF2773 0.47 -1.5 203,458 + GFF2773 0.47 +0.5 203,458 + GFF2773 0.47 -1.3 203,459 - GFF2773 0.47 -2.2 203,459 - GFF2773 0.47 -0.2 203,459 - GFF2773 0.47 +1.6 203,459 - GFF2773 0.47 +0.4 203,506 + GFF2773 0.52 -0.8 203,507 - GFF2773 0.52 -1.5 203,512 + GFF2773 0.53 -0.2 203,512 + GFF2773 0.53 -0.4 203,512 + GFF2773 0.53 -0.2 203,512 + GFF2773 0.53 -1.3 203,512 + GFF2773 0.53 -0.3 203,512 + GFF2773 0.53 -1.2 203,512 + GFF2773 0.53 -1.1 203,513 - GFF2773 0.53 -1.6 203,513 - GFF2773 0.53 +0.8 203,513 - GFF2773 0.53 -0.5 203,513 - GFF2773 0.53 +0.4 203,513 - GFF2773 0.53 +0.2 203,513 - GFF2773 0.53 -2.6 203,554 + GFF2773 0.57 -2.2 203,554 + GFF2773 0.57 -0.5 203,554 + GFF2773 0.57 -0.2 203,554 + GFF2773 0.57 -0.2 203,555 - GFF2773 0.57 -0.3 203,555 - GFF2773 0.57 +0.3 203,555 - GFF2773 0.57 -0.6 203,555 - GFF2773 0.57 -0.3 203,711 - GFF2773 0.73 +1.9 203,894 - +0.0 203,920 - -0.9 204,024 + -0.3 204,057 + -0.1 204,058 - -0.8 204,096 + -1.2 204,096 + -0.3 204,096 + +0.2 204,097 - -1.2 204,097 - +0.3 204,097 - -0.3 204,097 - +0.7 204,097 - -0.2 204,097 - -0.0 204,204 + GFF2774 0.16 +0.3 204,204 + GFF2774 0.16 -0.9 204,204 + GFF2774 0.16 +0.1 204,207 + GFF2774 0.17 -0.6 204,207 + GFF2774 0.17 -0.5 204,208 - GFF2774 0.17 -0.1 204,327 + GFF2774 0.29 +0.2 204,328 - GFF2774 0.29 -1.3 204,328 - GFF2774 0.29 -1.5 204,882 + GFF2774 0.88 -1.8 204,882 + GFF2774 0.88 -0.3 204,882 + GFF2774 0.88 -2.2 204,882 + GFF2774 0.88 +1.2 204,882 + GFF2774 0.88 +0.4 204,883 - GFF2774 0.88 -0.2 204,883 - GFF2774 0.88 -1.5 204,883 - GFF2774 0.88 -1.3 204,883 - GFF2774 0.88 +0.2 204,883 - GFF2774 0.88 +0.1 204,906 + +0.0 204,906 + +0.7 204,907 - -1.2 204,907 - -1.2 204,907 - +0.3 204,907 - -0.7 204,907 - -0.6 204,907 - -0.7 204,907 - -0.3 204,907 - -1.1 204,918 + -0.2 204,918 + +0.1 204,918 + -1.1 204,918 + -0.5 204,918 + +0.0 204,918 + +0.0 204,918 + +0.7 204,918 + +1.0 204,918 + -0.9 204,918 + -1.4 204,918 + +0.1 204,918 + -0.7 204,918 + +1.1 204,918 + -1.0 204,918 + -1.7 204,918 + +0.7 204,918 + -0.9 204,918 + -2.1 204,919 - -2.2 204,919 - +0.7 204,919 - -1.5 204,919 - +0.3 204,919 - +0.3 204,919 - +0.5 204,919 - -0.3 204,919 - -0.9 204,919 - -0.7 204,919 - -1.3 204,919 - +0.7 204,919 - -0.7 204,919 - -0.8 204,919 - -1.3 204,919 - -0.2 204,919 - -0.1 204,919 - +0.5
Or see this region's nucleotide sequence