Strain Fitness in Variovorax sp. SCN45 around GFF1687

Experiment: M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
330,894	-		GFF1686	0.21	+0.5
330,894	-		GFF1686	0.21	-1.5
330,894	-		GFF1686	0.21	-0.1
331,034	+		GFF1686	0.33	-2.1
331,035	-		GFF1686	0.33	-1.0
331,035	-		GFF1686	0.33	+0.9
331,793	+				-0.8
331,793	+				+0.2
331,793	+				-0.0
331,793	+				+0.7
331,794	-				-0.5
331,794	-				-0.0
331,794	-				-0.5
331,872	+				-0.5
331,969	+		GFF1687	0.16	+0.7
331,969	+		GFF1687	0.16	-0.0
331,970	-		GFF1687	0.16	+0.3
332,131	+		GFF1687	0.32	+2.3
332,255	-		GFF1687	0.45	-0.2
332,372	-		GFF1687	0.57	-0.1
332,372	-		GFF1687	0.57	-0.0
333,122	+		GFF1688	0.22	+3.9
333,123	-		GFF1688	0.22	+1.0
333,240	-		GFF1688	0.30	-0.5
333,434	+		GFF1688	0.43	+0.7
333,488	+		GFF1688	0.47	+0.1
333,489	-		GFF1688	0.47	+1.0
333,515	+		GFF1688	0.49	-0.8
333,515	+		GFF1688	0.49	-0.2
333,656	+		GFF1688	0.59	+0.5
333,774	-		GFF1688	0.67	+0.0