Strain Fitness in Variovorax sp. SCN45 around GFF7258

Experiment: M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
4,013	-		GFF7257	0.21	+0.6
4,311	+		GFF7257	0.52	-1.1
4,595	-		GFF7257	0.81	+0.2
4,886	-				-0.7
5,051	+				+0.0
5,051	+				-0.4
5,053	+				-0.4
5,670	-		GFF7258	0.46	+0.2
6,052	+		GFF7258	0.71	+0.4
6,219	-		GFF7258	0.82	+1.4
6,293	+		GFF7258	0.86	+1.1
6,335	+		GFF7258	0.89	+0.4
6,336	-		GFF7258	0.89	-1.0
6,398	+				-0.1
6,408	+				-0.2
6,568	-				+0.8
6,568	-				-0.7
6,591	+				-0.6
6,592	-				-0.3
6,823	+		GFF7259	0.17	-0.7
6,823	+		GFF7259	0.17	-0.5
6,824	-		GFF7259	0.17	-0.2
7,125	+		GFF7259	0.53	-0.3
7,207	+		GFF7259	0.63	-0.1
7,207	+		GFF7259	0.63	-1.5
7,208	-		GFF7259	0.63	+0.6
7,208	-		GFF7259	0.63	-0.2
7,261	+		GFF7259	0.70	+2.2