Experiment: M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF7207 and GFF7208 overlap by 14 nucleotides GFF7208 and GFF7209 are separated by 15 nucleotides GFF7209 and GFF7210 are separated by 49 nucleotides GFF7210 and GFF7211 overlap by 11 nucleotides
GFF7207 - no description, at 24,271 to 24,546
GFF7207
GFF7208 - ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component, at 24,533 to 25,306
GFF7208
GFF7209 - ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate), at 25,322 to 26,347
GFF7209
GFF7210 - Hydroxymethylpyrimidine ABC transporter, transmembrane component, at 26,397 to 27,191
GFF7210
GFF7211 - Nitrilotriacetate monooxygenase component A (EC 1.14.13.-), at 27,181 to 28,599
GFF7211
Position (kb) 25
26
27 Strain fitness (log2 ratio) -2
-1
0
1
2 at 24.440 kb on + strand, within GFF7207 at 24.440 kb on + strand, within GFF7207 at 24.440 kb on + strand, within GFF7207 at 24.440 kb on + strand, within GFF7207 at 24.440 kb on + strand, within GFF7207 at 24.441 kb on - strand, within GFF7207 at 24.441 kb on - strand, within GFF7207 at 24.441 kb on - strand, within GFF7207 at 24.441 kb on - strand, within GFF7207 at 24.585 kb on + strand at 24.585 kb on + strand at 24.585 kb on + strand at 24.586 kb on - strand at 24.586 kb on - strand at 24.586 kb on - strand at 25.386 kb on + strand at 25.386 kb on + strand at 25.386 kb on + strand at 25.387 kb on - strand at 25.387 kb on - strand at 25.537 kb on - strand, within GFF7209 at 25.537 kb on - strand, within GFF7209 at 25.548 kb on + strand, within GFF7209 at 25.548 kb on + strand, within GFF7209 at 25.549 kb on - strand, within GFF7209 at 25.549 kb on - strand, within GFF7209 at 25.680 kb on + strand, within GFF7209 at 25.680 kb on + strand, within GFF7209 at 25.850 kb on + strand, within GFF7209 at 25.869 kb on + strand, within GFF7209 at 25.870 kb on - strand, within GFF7209 at 25.959 kb on + strand, within GFF7209 at 26.194 kb on - strand, within GFF7209 at 26.951 kb on - strand, within GFF7210 at 27.056 kb on - strand, within GFF7210 at 27.265 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL remove 24,440 + GFF7207 0.61 -0.3 24,440 + GFF7207 0.61 -1.7 24,440 + GFF7207 0.61 +1.1 24,440 + GFF7207 0.61 -1.4 24,440 + GFF7207 0.61 -0.9 24,441 - GFF7207 0.62 -1.8 24,441 - GFF7207 0.62 -1.5 24,441 - GFF7207 0.62 -1.2 24,441 - GFF7207 0.62 -2.3 24,585 + -0.5 24,585 + -0.7 24,585 + +0.5 24,586 - +0.3 24,586 - -0.9 24,586 - -0.6 25,386 + +0.7 25,386 + -0.5 25,386 + +0.1 25,387 - +0.4 25,387 - +0.5 25,537 - GFF7209 0.21 -0.7 25,537 - GFF7209 0.21 +0.3 25,548 + GFF7209 0.22 -1.1 25,548 + GFF7209 0.22 -0.1 25,549 - GFF7209 0.22 -0.1 25,549 - GFF7209 0.22 -1.3 25,680 + GFF7209 0.35 -0.7 25,680 + GFF7209 0.35 -0.5 25,850 + GFF7209 0.51 +1.9 25,869 + GFF7209 0.53 -0.7 25,870 - GFF7209 0.53 +1.0 25,959 + GFF7209 0.62 -0.9 26,194 - GFF7209 0.85 -0.3 26,951 - GFF7210 0.70 +0.2 27,056 - GFF7210 0.83 -0.8 27,265 + +1.5
Or see this region's nucleotide sequence