Strain Fitness in Variovorax sp. SCN45 around GFF6783

Experiment: M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
32,216	+		GFF6782	0.49	+0.3
32,216	+		GFF6782	0.49	-0.7
32,216	+		GFF6782	0.49	-1.1
32,534	+		GFF6782	0.72	+1.9
32,534	+		GFF6782	0.72	+1.9
32,534	+		GFF6782	0.72	-0.2
32,534	+		GFF6782	0.72	-0.3
32,535	-		GFF6782	0.72	-0.3
32,732	+		GFF6782	0.86	-1.7
32,732	+		GFF6782	0.86	+1.1
32,733	-		GFF6782	0.86	+0.1
32,733	-		GFF6782	0.86	+0.4
32,753	+		GFF6782	0.87	-1.0
33,572	+		GFF6783	0.61	-1.3
33,986	+				-0.0
34,003	+				-1.1
34,003	+				-1.4
34,003	+				+0.1
34,004	-				-0.4
34,004	-				-0.4
34,178	+		GFF6784	0.12	-0.2
34,178	+		GFF6784	0.12	+0.1
34,179	-		GFF6784	0.13	-0.2
34,299	-		GFF6784	0.22	-0.4
34,299	-		GFF6784	0.22	-0.1
34,331	+		GFF6784	0.24	-0.0
34,481	+		GFF6784	0.36	+0.5
34,527	+		GFF6784	0.39	-0.4
34,527	+		GFF6784	0.39	-1.2
34,607	+		GFF6784	0.46	-0.1
34,607	+		GFF6784	0.46	-0.8
34,608	-		GFF6784	0.46	+0.0
34,662	-		GFF6784	0.50	+0.2