Experiment: M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2288 and GFF2289 are separated by 0 nucleotides GFF2289 and GFF2290 are separated by 111 nucleotides GFF2290 and GFF2291 are separated by 81 nucleotides
GFF2288 - Glutathione-regulated potassium-efflux system protein KefC, at 343,350 to 345,206
GFF2288
GFF2289 - Glutathione-regulated potassium-efflux system ancillary protein KefF, at 345,207 to 345,914
GFF2289
GFF2290 - Chromosome partitioning protein ParA, at 346,026 to 346,646
GFF2290
GFF2291 - Nodulation protein N-related dehydratase, at 346,728 to 347,189
GFF2291
Position (kb) 345
346 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 344.227 kb on + strand, within GFF2288 at 344.257 kb on + strand, within GFF2288 at 344.257 kb on + strand, within GFF2288 at 344.257 kb on + strand, within GFF2288 at 344.257 kb on + strand, within GFF2288 at 344.257 kb on + strand, within GFF2288 at 344.257 kb on + strand, within GFF2288 at 344.257 kb on + strand, within GFF2288 at 344.258 kb on - strand, within GFF2288 at 345.100 kb on + strand at 345.101 kb on - strand at 345.166 kb on + strand at 345.167 kb on - strand at 345.167 kb on - strand at 345.445 kb on + strand, within GFF2289 at 345.445 kb on + strand, within GFF2289 at 345.445 kb on + strand, within GFF2289 at 345.446 kb on - strand, within GFF2289 at 345.446 kb on - strand, within GFF2289 at 345.527 kb on - strand, within GFF2289 at 345.527 kb on - strand, within GFF2289 at 345.535 kb on + strand, within GFF2289 at 345.535 kb on + strand, within GFF2289 at 345.535 kb on + strand, within GFF2289 at 345.535 kb on + strand, within GFF2289 at 345.535 kb on + strand, within GFF2289 at 345.535 kb on + strand, within GFF2289 at 345.536 kb on - strand, within GFF2289 at 345.536 kb on - strand, within GFF2289 at 345.536 kb on - strand, within GFF2289 at 345.550 kb on + strand, within GFF2289 at 345.550 kb on + strand, within GFF2289 at 345.550 kb on + strand, within GFF2289 at 345.550 kb on + strand, within GFF2289 at 345.551 kb on - strand, within GFF2289 at 345.551 kb on - strand, within GFF2289 at 345.625 kb on + strand, within GFF2289 at 345.626 kb on - strand, within GFF2289 at 345.683 kb on - strand, within GFF2289 at 345.685 kb on + strand, within GFF2289 at 345.685 kb on + strand, within GFF2289 at 345.685 kb on + strand, within GFF2289 at 345.686 kb on - strand, within GFF2289 at 345.686 kb on - strand, within GFF2289 at 345.773 kb on - strand, within GFF2289 at 345.773 kb on - strand, within GFF2289 at 345.773 kb on - strand, within GFF2289 at 345.773 kb on - strand, within GFF2289 at 345.781 kb on + strand, within GFF2289 at 345.781 kb on + strand, within GFF2289 at 345.880 kb on + strand at 345.880 kb on + strand at 345.880 kb on + strand at 345.880 kb on + strand at 345.880 kb on + strand at 345.880 kb on + strand at 345.880 kb on + strand at 345.881 kb on - strand at 345.881 kb on - strand at 345.881 kb on - strand at 345.881 kb on - strand at 345.881 kb on - strand at 345.944 kb on + strand at 345.944 kb on + strand at 345.944 kb on + strand at 345.944 kb on + strand at 345.944 kb on + strand at 345.944 kb on + strand at 345.944 kb on + strand at 345.944 kb on + strand at 345.944 kb on + strand at 345.944 kb on + strand at 345.944 kb on + strand at 345.944 kb on + strand at 345.945 kb on - strand at 345.945 kb on - strand at 345.945 kb on - strand at 345.945 kb on - strand at 345.945 kb on - strand at 345.945 kb on - strand at 345.945 kb on - strand at 345.945 kb on - strand at 345.945 kb on - strand at 345.945 kb on - strand at 345.945 kb on - strand at 345.945 kb on - strand at 345.989 kb on + strand at 345.990 kb on - strand at 346.025 kb on + strand at 346.025 kb on + strand at 346.026 kb on - strand at 346.363 kb on + strand, within GFF2290 at 346.365 kb on + strand, within GFF2290 at 346.365 kb on + strand, within GFF2290 at 346.365 kb on + strand, within GFF2290 at 346.365 kb on + strand, within GFF2290 at 346.365 kb on + strand, within GFF2290 at 346.365 kb on + strand, within GFF2290 at 346.365 kb on + strand, within GFF2290 at 346.365 kb on + strand, within GFF2290 at 346.366 kb on - strand, within GFF2290 at 346.366 kb on - strand, within GFF2290 at 346.366 kb on - strand, within GFF2290 at 346.366 kb on - strand, within GFF2290 at 346.366 kb on - strand, within GFF2290 at 346.539 kb on + strand, within GFF2290 at 346.539 kb on + strand, within GFF2290 at 346.539 kb on + strand, within GFF2290 at 346.539 kb on + strand, within GFF2290 at 346.539 kb on + strand, within GFF2290 at 346.539 kb on + strand, within GFF2290 at 346.539 kb on + strand, within GFF2290 at 346.539 kb on + strand, within GFF2290 at 346.539 kb on + strand, within GFF2290 at 346.539 kb on + strand, within GFF2290 at 346.539 kb on + strand, within GFF2290 at 346.539 kb on + strand, within GFF2290 at 346.540 kb on - strand, within GFF2290 at 346.540 kb on - strand, within GFF2290 at 346.540 kb on - strand, within GFF2290 at 346.540 kb on - strand, within GFF2290 at 346.540 kb on - strand, within GFF2290 at 346.540 kb on - strand, within GFF2290 at 346.540 kb on - strand, within GFF2290 at 346.540 kb on - strand, within GFF2290 at 346.540 kb on - strand, within GFF2290 at 346.540 kb on - strand, within GFF2290 at 346.540 kb on - strand, within GFF2290
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL remove 344,227 + GFF2288 0.47 -0.4 344,257 + GFF2288 0.49 +0.2 344,257 + GFF2288 0.49 +0.3 344,257 + GFF2288 0.49 -1.0 344,257 + GFF2288 0.49 -0.6 344,257 + GFF2288 0.49 -0.3 344,257 + GFF2288 0.49 -0.7 344,257 + GFF2288 0.49 -1.0 344,258 - GFF2288 0.49 -0.1 345,100 + -1.7 345,101 - +1.3 345,166 + -0.1 345,167 - -1.5 345,167 - +1.0 345,445 + GFF2289 0.34 -0.2 345,445 + GFF2289 0.34 -1.0 345,445 + GFF2289 0.34 +0.6 345,446 - GFF2289 0.34 -1.3 345,446 - GFF2289 0.34 +1.1 345,527 - GFF2289 0.45 -1.1 345,527 - GFF2289 0.45 +0.4 345,535 + GFF2289 0.46 -0.5 345,535 + GFF2289 0.46 -1.0 345,535 + GFF2289 0.46 -2.8 345,535 + GFF2289 0.46 +0.6 345,535 + GFF2289 0.46 -1.1 345,535 + GFF2289 0.46 +0.1 345,536 - GFF2289 0.46 +0.9 345,536 - GFF2289 0.46 -0.6 345,536 - GFF2289 0.46 -0.1 345,550 + GFF2289 0.48 +0.2 345,550 + GFF2289 0.48 -0.3 345,550 + GFF2289 0.48 +0.1 345,550 + GFF2289 0.48 +0.1 345,551 - GFF2289 0.49 +3.2 345,551 - GFF2289 0.49 -0.7 345,625 + GFF2289 0.59 -0.3 345,626 - GFF2289 0.59 +0.3 345,683 - GFF2289 0.67 -1.0 345,685 + GFF2289 0.68 -2.5 345,685 + GFF2289 0.68 -0.4 345,685 + GFF2289 0.68 -0.6 345,686 - GFF2289 0.68 -0.4 345,686 - GFF2289 0.68 -2.4 345,773 - GFF2289 0.80 -0.1 345,773 - GFF2289 0.80 -0.5 345,773 - GFF2289 0.80 -1.8 345,773 - GFF2289 0.80 +0.2 345,781 + GFF2289 0.81 -0.6 345,781 + GFF2289 0.81 -0.7 345,880 + +0.7 345,880 + +0.1 345,880 + -0.5 345,880 + -1.0 345,880 + +0.6 345,880 + +2.2 345,880 + -0.3 345,881 - -0.4 345,881 - -1.6 345,881 - +0.2 345,881 - +0.1 345,881 - +1.4 345,944 + -0.3 345,944 + -0.3 345,944 + +1.2 345,944 + -1.3 345,944 + +1.6 345,944 + +0.2 345,944 + +0.5 345,944 + +1.0 345,944 + +2.2 345,944 + +0.5 345,944 + -0.6 345,944 + -0.1 345,945 - -0.1 345,945 - -0.1 345,945 - +1.3 345,945 - +0.1 345,945 - -0.3 345,945 - -0.4 345,945 - +0.2 345,945 - +0.4 345,945 - -0.7 345,945 - +1.4 345,945 - -0.5 345,945 - -0.1 345,989 + +0.3 345,990 - -0.0 346,025 + -0.8 346,025 + -0.3 346,026 - +2.0 346,363 + GFF2290 0.54 -0.2 346,365 + GFF2290 0.55 -1.3 346,365 + GFF2290 0.55 +1.3 346,365 + GFF2290 0.55 +0.1 346,365 + GFF2290 0.55 +0.0 346,365 + GFF2290 0.55 -0.5 346,365 + GFF2290 0.55 +1.2 346,365 + GFF2290 0.55 -0.7 346,365 + GFF2290 0.55 +0.0 346,366 - GFF2290 0.55 -0.0 346,366 - GFF2290 0.55 -0.8 346,366 - GFF2290 0.55 -2.7 346,366 - GFF2290 0.55 +0.8 346,366 - GFF2290 0.55 -0.7 346,539 + GFF2290 0.83 -2.0 346,539 + GFF2290 0.83 -0.6 346,539 + GFF2290 0.83 -0.2 346,539 + GFF2290 0.83 +1.5 346,539 + GFF2290 0.83 -0.9 346,539 + GFF2290 0.83 -0.4 346,539 + GFF2290 0.83 -0.3 346,539 + GFF2290 0.83 +0.9 346,539 + GFF2290 0.83 +1.2 346,539 + GFF2290 0.83 -1.6 346,539 + GFF2290 0.83 -0.4 346,539 + GFF2290 0.83 -0.1 346,540 - GFF2290 0.83 -1.8 346,540 - GFF2290 0.83 -1.4 346,540 - GFF2290 0.83 +1.0 346,540 - GFF2290 0.83 +0.0 346,540 - GFF2290 0.83 +0.6 346,540 - GFF2290 0.83 -0.8 346,540 - GFF2290 0.83 -0.6 346,540 - GFF2290 0.83 +0.9 346,540 - GFF2290 0.83 +0.5 346,540 - GFF2290 0.83 -0.5 346,540 - GFF2290 0.83 +0.4
Or see this region's nucleotide sequence