Strain Fitness in Variovorax sp. SCN45 around GFF124

Experiment: M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
151,764	+				+0.1
151,915	-		GFF123	0.24	-0.1
151,917	+		GFF123	0.25	-0.3
151,941	+		GFF123	0.27	-0.1
152,115	+		GFF123	0.45	+0.6
152,115	+		GFF123	0.45	-1.0
152,116	-		GFF123	0.46	-0.8
152,368	-		GFF123	0.72	+0.4
152,481	-		GFF123	0.84	-0.6
152,527	-		GFF123	0.89	+0.2
152,759	-				-0.0
152,789	-		GFF124	0.11	-0.2
152,907	+		GFF124	0.20	+0.4
153,067	+		GFF124	0.33	+0.1
153,067	+		GFF124	0.33	+1.0
153,067	+		GFF124	0.33	+1.0
153,068	-		GFF124	0.33	+1.1
153,068	-		GFF124	0.33	+0.2
153,068	-		GFF124	0.33	+0.1
153,068	-		GFF124	0.33	-1.0
153,233	-		GFF124	0.46	-1.3
153,233	-		GFF124	0.46	-0.3
153,590	-		GFF124	0.73	-1.9
154,108	-		GFF125	0.17	-0.2
154,596	+		GFF125	0.64	+0.1
154,596	+		GFF125	0.64	-0.1
154,596	+		GFF125	0.64	-0.2
154,770	+		GFF125	0.80	-1.2
154,771	-		GFF125	0.80	+0.1