Strain Fitness in Variovorax sp. SCN45 around GFF7182

Experiment: M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
58	+				+0.9
74	+				+0.6
108	+				+0.3
109	-				-1.1
113	-				-0.6
194	+				+1.5
207	+				+1.7
256	+		GFF7182	0.20	+0.9
350	-		GFF7182	0.40	-0.3
416	+		GFF7182	0.55	-0.9
417	-		GFF7182	0.55	-1.3
420	+		GFF7182	0.55	-0.3
421	-		GFF7182	0.56	-0.5
421	-		GFF7182	0.56	-0.3
529	-		GFF7182	0.79	-2.8
529	-		GFF7182	0.79	-0.5
903	-				-0.7
911	+				+0.8
911	+				-0.6
940	-		GFF7183	0.12	-0.4
1,027	-		GFF7183	0.25	+0.3
1,036	-		GFF7183	0.26	-0.3
1,077	+		GFF7183	0.32	-0.5
1,078	-		GFF7183	0.32	-0.4
1,078	-		GFF7183	0.32	-1.0
1,086	+		GFF7183	0.34	+0.4
1,221	+		GFF7183	0.54	+0.0
1,524	-				-1.0
1,524	-				+0.8