Strain Fitness in Variovorax sp. SCN45 around GFF6976

Experiment: M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
47,939	-		GFF6975	0.49	-0.8
48,283	-				+0.1
48,510	-				-1.1
48,510	-				+0.1
48,617	+				+0.5
48,617	+				+0.2
48,618	-				-0.5
48,767	+				+0.6
48,768	-				-0.1
49,080	+		GFF6976	0.22	-0.2
49,080	+		GFF6976	0.22	+0.2
49,080	+		GFF6976	0.22	-0.1
49,081	-		GFF6976	0.22	-0.7
49,081	-		GFF6976	0.22	-0.2
49,081	-		GFF6976	0.22	-1.0
49,288	+		GFF6976	0.51	-0.6
49,288	+		GFF6976	0.51	+0.5
49,289	-		GFF6976	0.52	+0.2
49,310	-		GFF6976	0.55	-0.1
49,700	+				-0.3
49,700	+				+0.2
49,746	-		GFF6977	0.18	+1.0
50,109	+		GFF6977	0.83	-0.6
50,109	+		GFF6977	0.83	+0.6
50,117	+		GFF6977	0.85	+0.0
50,118	-		GFF6977	0.85	-0.6
50,118	-		GFF6977	0.85	-0.2
50,428	+		GFF6978	0.30	+0.3