Strain Fitness in Variovorax sp. SCN45 around GFF4039

Experiment: M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
248,101	+		GFF4038	0.30	-0.2
248,438	-		GFF4038	0.58	-0.3
248,488	+		GFF4038	0.62	-1.2
248,489	-		GFF4038	0.62	-0.7
248,880	-				-0.1
249,488	-		GFF4039	0.41	+1.0
249,804	+		GFF4039	0.65	+3.1
249,804	+		GFF4039	0.65	-1.8
249,805	-		GFF4039	0.65	-0.3
250,027	-		GFF4039	0.82	+0.1
250,027	-		GFF4039	0.82	-2.1
250,279	-				-1.0
250,412	+				+0.1
250,412	+				-1.1
250,413	-				-0.7
250,413	-				+0.0
250,413	-				+0.6
250,416	+				+0.1
250,416	+				-0.2
250,417	-				-1.2
250,417	-				-1.2
250,447	-				+0.1
250,638	-				+0.0
250,693	+				-0.2
250,704	+				+0.3
250,704	+				-0.1
250,704	+				-0.3
250,705	-				-0.7
250,705	-				+0.0
250,705	-				+0.2
250,705	-				-0.1
250,705	-				+0.1
250,705	-				+0.1
250,735	-				-0.3
250,740	+				-2.0
250,803	-				+0.0
250,803	-				+0.5
251,227	+				+0.6
251,228	-				-0.1