Experiment: M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2675 and GFF2676 overlap by 11 nucleotides GFF2676 and GFF2677 are separated by 61 nucleotides
GFF2675 - 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.180), at 96,586 to 97,722
GFF2675
GFF2676 - Dialkylrecorsinol condensing enzyme, at 97,712 to 98,770
GFF2676
GFF2677 - Aerobic glycerol-3-phosphate dehydrogenase (EC 1.1.5.3), at 98,832 to 100,415
GFF2677
Position (kb) 97
98
99 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 96.815 kb on + strand, within GFF2675 at 96.815 kb on + strand, within GFF2675 at 96.907 kb on - strand, within GFF2675 at 96.907 kb on - strand, within GFF2675 at 96.907 kb on - strand, within GFF2675 at 97.040 kb on + strand, within GFF2675 at 97.040 kb on + strand, within GFF2675 at 97.041 kb on - strand, within GFF2675 at 97.566 kb on - strand, within GFF2675 at 97.566 kb on - strand, within GFF2675 at 97.722 kb on + strand at 97.723 kb on - strand at 97.723 kb on - strand at 97.781 kb on - strand at 97.852 kb on + strand, within GFF2676 at 97.856 kb on + strand, within GFF2676 at 97.856 kb on + strand, within GFF2676 at 97.856 kb on + strand, within GFF2676 at 97.875 kb on + strand, within GFF2676 at 97.875 kb on + strand, within GFF2676 at 97.875 kb on + strand, within GFF2676 at 97.875 kb on + strand, within GFF2676 at 97.875 kb on + strand, within GFF2676 at 97.875 kb on + strand, within GFF2676 at 97.875 kb on + strand, within GFF2676 at 97.875 kb on + strand, within GFF2676 at 97.876 kb on - strand, within GFF2676 at 97.876 kb on - strand, within GFF2676 at 97.876 kb on - strand, within GFF2676 at 97.876 kb on - strand, within GFF2676 at 97.876 kb on - strand, within GFF2676 at 97.876 kb on - strand, within GFF2676 at 97.947 kb on + strand, within GFF2676 at 97.948 kb on - strand, within GFF2676 at 97.948 kb on - strand, within GFF2676 at 98.401 kb on - strand, within GFF2676 at 98.746 kb on + strand at 98.747 kb on - strand at 98.986 kb on + strand at 98.986 kb on + strand at 98.986 kb on + strand at 98.987 kb on - strand at 99.097 kb on + strand, within GFF2677 at 99.098 kb on - strand, within GFF2677 at 99.358 kb on + strand, within GFF2677 at 99.359 kb on - strand, within GFF2677 at 99.359 kb on - strand, within GFF2677 at 99.359 kb on - strand, within GFF2677 at 99.359 kb on - strand, within GFF2677 at 99.422 kb on - strand, within GFF2677 at 99.422 kb on - strand, within GFF2677 at 99.422 kb on - strand, within GFF2677 at 99.430 kb on - strand, within GFF2677 at 99.464 kb on - strand, within GFF2677 at 99.487 kb on + strand, within GFF2677 at 99.487 kb on + strand, within GFF2677 at 99.488 kb on - strand, within GFF2677 at 99.625 kb on + strand, within GFF2677 at 99.625 kb on + strand, within GFF2677 at 99.625 kb on + strand, within GFF2677 at 99.625 kb on + strand, within GFF2677 at 99.625 kb on + strand, within GFF2677 at 99.625 kb on + strand, within GFF2677 at 99.626 kb on - strand, within GFF2677 at 99.626 kb on - strand, within GFF2677 at 99.626 kb on - strand, within GFF2677 at 99.626 kb on - strand, within GFF2677 at 99.626 kb on - strand, within GFF2677 at 99.626 kb on - strand, within GFF2677 at 99.626 kb on - strand, within GFF2677
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL remove 96,815 + GFF2675 0.20 -0.4 96,815 + GFF2675 0.20 -2.5 96,907 - GFF2675 0.28 -0.7 96,907 - GFF2675 0.28 -0.0 96,907 - GFF2675 0.28 -0.6 97,040 + GFF2675 0.40 -1.1 97,040 + GFF2675 0.40 +1.9 97,041 - GFF2675 0.40 +1.1 97,566 - GFF2675 0.86 -1.2 97,566 - GFF2675 0.86 +0.3 97,722 + -0.3 97,723 - -1.7 97,723 - +0.5 97,781 - +1.0 97,852 + GFF2676 0.13 -0.2 97,856 + GFF2676 0.14 +0.4 97,856 + GFF2676 0.14 +0.3 97,856 + GFF2676 0.14 +0.4 97,875 + GFF2676 0.15 -1.2 97,875 + GFF2676 0.15 -2.0 97,875 + GFF2676 0.15 +1.7 97,875 + GFF2676 0.15 -0.0 97,875 + GFF2676 0.15 -0.7 97,875 + GFF2676 0.15 -0.1 97,875 + GFF2676 0.15 -0.3 97,875 + GFF2676 0.15 +0.9 97,876 - GFF2676 0.15 +0.6 97,876 - GFF2676 0.15 +0.3 97,876 - GFF2676 0.15 +0.3 97,876 - GFF2676 0.15 -0.9 97,876 - GFF2676 0.15 -1.3 97,876 - GFF2676 0.15 -0.0 97,947 + GFF2676 0.22 +0.9 97,948 - GFF2676 0.22 +0.0 97,948 - GFF2676 0.22 -0.1 98,401 - GFF2676 0.65 -0.0 98,746 + +1.3 98,747 - +1.0 98,986 + +0.6 98,986 + -0.1 98,986 + -1.6 98,987 - -1.6 99,097 + GFF2677 0.17 -0.4 99,098 - GFF2677 0.17 -1.7 99,358 + GFF2677 0.33 -1.4 99,359 - GFF2677 0.33 -0.0 99,359 - GFF2677 0.33 +0.8 99,359 - GFF2677 0.33 +1.9 99,359 - GFF2677 0.33 -0.4 99,422 - GFF2677 0.37 -2.4 99,422 - GFF2677 0.37 -0.0 99,422 - GFF2677 0.37 -1.4 99,430 - GFF2677 0.38 -0.1 99,464 - GFF2677 0.40 -0.2 99,487 + GFF2677 0.41 -1.2 99,487 + GFF2677 0.41 +0.1 99,488 - GFF2677 0.41 -1.3 99,625 + GFF2677 0.50 -1.2 99,625 + GFF2677 0.50 +0.6 99,625 + GFF2677 0.50 +1.0 99,625 + GFF2677 0.50 +0.1 99,625 + GFF2677 0.50 -0.4 99,625 + GFF2677 0.50 +0.7 99,626 - GFF2677 0.50 -0.5 99,626 - GFF2677 0.50 +0.9 99,626 - GFF2677 0.50 +0.1 99,626 - GFF2677 0.50 -1.4 99,626 - GFF2677 0.50 -2.9 99,626 - GFF2677 0.50 -2.5 99,626 - GFF2677 0.50 -0.7
Or see this region's nucleotide sequence