Experiment: M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF6952 and GFF6953 are separated by 7 nucleotides GFF6953 and GFF6954 are separated by 183 nucleotides GFF6954 and GFF6955 are separated by 7 nucleotides GFF6955 and GFF6956 are separated by 260 nucleotides
GFF6952 - Metallo-beta-lactamase family protein, RNA-specific, at 28,151 to 29,503
GFF6952
GFF6953 - Universal stress protein UspA and related nucleotide-binding proteins, at 29,511 to 30,335
GFF6953
GFF6954 - no description, at 30,519 to 30,722
GFF6954
GFF6955 - no description, at 30,730 to 30,864
GFF6955
GFF6956 - Heavy-metal-associated domain (N-terminus) and membrane-bounded cytochrome biogenesis cycZ-like domain, possible membrane copper tolerance protein, at 31,125 to 31,820
GFF6956
Position (kb) 29
30
31 Strain fitness (log2 ratio) -2
-1
0
1 at 28.650 kb on + strand, within GFF6952 at 28.650 kb on + strand, within GFF6952 at 28.651 kb on - strand, within GFF6952 at 28.659 kb on + strand, within GFF6952 at 28.659 kb on + strand, within GFF6952 at 28.660 kb on - strand, within GFF6952 at 28.878 kb on + strand, within GFF6952 at 28.878 kb on + strand, within GFF6952 at 28.878 kb on + strand, within GFF6952 at 28.879 kb on - strand, within GFF6952 at 28.879 kb on - strand, within GFF6952 at 28.879 kb on - strand, within GFF6952 at 28.899 kb on + strand, within GFF6952 at 28.899 kb on + strand, within GFF6952 at 28.900 kb on - strand, within GFF6952 at 28.900 kb on - strand, within GFF6952 at 29.018 kb on + strand, within GFF6952 at 29.018 kb on + strand, within GFF6952 at 29.018 kb on + strand, within GFF6952 at 29.018 kb on + strand, within GFF6952 at 29.019 kb on - strand, within GFF6952 at 29.019 kb on - strand, within GFF6952 at 29.130 kb on + strand, within GFF6952 at 29.131 kb on - strand, within GFF6952 at 29.131 kb on - strand, within GFF6952 at 29.295 kb on - strand, within GFF6952 at 29.728 kb on + strand, within GFF6953 at 29.729 kb on - strand, within GFF6953 at 29.729 kb on - strand, within GFF6953 at 29.899 kb on + strand, within GFF6953 at 30.019 kb on + strand, within GFF6953 at 30.019 kb on + strand, within GFF6953 at 30.019 kb on + strand, within GFF6953 at 30.019 kb on + strand, within GFF6953 at 30.019 kb on + strand, within GFF6953 at 30.020 kb on - strand, within GFF6953 at 30.020 kb on - strand, within GFF6953 at 30.020 kb on - strand, within GFF6953 at 30.022 kb on - strand, within GFF6953 at 30.187 kb on + strand, within GFF6953 at 30.187 kb on + strand, within GFF6953
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL remove 28,650 + GFF6952 0.37 -0.2 28,650 + GFF6952 0.37 -0.2 28,651 - GFF6952 0.37 -0.2 28,659 + GFF6952 0.38 +0.2 28,659 + GFF6952 0.38 -0.5 28,660 - GFF6952 0.38 -1.4 28,878 + GFF6952 0.54 -0.6 28,878 + GFF6952 0.54 -0.9 28,878 + GFF6952 0.54 +0.5 28,879 - GFF6952 0.54 +0.3 28,879 - GFF6952 0.54 +1.0 28,879 - GFF6952 0.54 +0.8 28,899 + GFF6952 0.55 -0.4 28,899 + GFF6952 0.55 -0.8 28,900 - GFF6952 0.55 -0.6 28,900 - GFF6952 0.55 +0.4 29,018 + GFF6952 0.64 -0.5 29,018 + GFF6952 0.64 -1.6 29,018 + GFF6952 0.64 -0.9 29,018 + GFF6952 0.64 -0.8 29,019 - GFF6952 0.64 +0.2 29,019 - GFF6952 0.64 -2.1 29,130 + GFF6952 0.72 -0.2 29,131 - GFF6952 0.72 -0.8 29,131 - GFF6952 0.72 -0.8 29,295 - GFF6952 0.85 +0.2 29,728 + GFF6953 0.26 +0.8 29,729 - GFF6953 0.26 +0.0 29,729 - GFF6953 0.26 -0.9 29,899 + GFF6953 0.47 +0.6 30,019 + GFF6953 0.62 -0.2 30,019 + GFF6953 0.62 -0.4 30,019 + GFF6953 0.62 -0.6 30,019 + GFF6953 0.62 -0.3 30,019 + GFF6953 0.62 -0.3 30,020 - GFF6953 0.62 -0.6 30,020 - GFF6953 0.62 +0.6 30,020 - GFF6953 0.62 -0.2 30,022 - GFF6953 0.62 +0.6 30,187 + GFF6953 0.82 -0.3 30,187 + GFF6953 0.82 +0.6
Or see this region's nucleotide sequence