Experiment: M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF6920 and GFF6921 are separated by 32 nucleotides GFF6921 and GFF6922 are separated by 76 nucleotides GFF6922 and GFF6923 are separated by 52 nucleotides
GFF6920 - no description, at 1 to 81
GFF6920
GFF6921 - no description, at 114 to 539
GFF6921
GFF6922 - Deacetylases, including yeast histone deacetylase and acetoin utilization protein, at 616 to 1,542
GFF6922
GFF6923 - Acetate permease ActP (cation/acetate symporter), at 1,595 to 3,331
GFF6923
Position (kb) 0
1
2 Strain fitness (log2 ratio) -1
0
1 at 0.058 kb on + strand, within GFF6920 at 0.324 kb on + strand, within GFF6921 at 0.324 kb on + strand, within GFF6921 at 0.325 kb on - strand, within GFF6921 at 0.325 kb on - strand, within GFF6921 at 0.325 kb on - strand, within GFF6921 at 0.325 kb on - strand, within GFF6921 at 0.325 kb on - strand, within GFF6921 at 0.396 kb on + strand, within GFF6921 at 0.396 kb on + strand, within GFF6921 at 0.628 kb on + strand at 0.740 kb on - strand, within GFF6922 at 1.327 kb on + strand, within GFF6922 at 1.327 kb on + strand, within GFF6922 at 1.327 kb on + strand, within GFF6922 at 1.327 kb on + strand, within GFF6922 at 1.396 kb on + strand, within GFF6922 at 1.397 kb on - strand, within GFF6922 at 1.478 kb on - strand at 2.091 kb on + strand, within GFF6923 at 2.091 kb on + strand, within GFF6923 at 2.092 kb on - strand, within GFF6923 at 2.092 kb on - strand, within GFF6923 at 2.328 kb on + strand, within GFF6923 at 2.329 kb on - strand, within GFF6923
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL remove 58 + GFF6920 0.70 +0.5 324 + GFF6921 0.49 -0.9 324 + GFF6921 0.49 -1.0 325 - GFF6921 0.50 -0.4 325 - GFF6921 0.50 -1.2 325 - GFF6921 0.50 -0.1 325 - GFF6921 0.50 -1.0 325 - GFF6921 0.50 -0.3 396 + GFF6921 0.66 +0.2 396 + GFF6921 0.66 -0.2 628 + +1.1 740 - GFF6922 0.13 +0.0 1,327 + GFF6922 0.77 +0.2 1,327 + GFF6922 0.77 -0.8 1,327 + GFF6922 0.77 -0.0 1,327 + GFF6922 0.77 +0.0 1,396 + GFF6922 0.84 +1.5 1,397 - GFF6922 0.84 +0.6 1,478 - -0.2 2,091 + GFF6923 0.29 -0.5 2,091 + GFF6923 0.29 +0.0 2,092 - GFF6923 0.29 -0.7 2,092 - GFF6923 0.29 -0.8 2,328 + GFF6923 0.42 -0.6 2,329 - GFF6923 0.42 -0.7
Or see this region's nucleotide sequence