Experiment: M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF6615 and GFF6616 are separated by 78 nucleotides GFF6616 and GFF6617 are separated by 581 nucleotides GFF6617 and GFF6618 are separated by 79 nucleotides
GFF6615 - putative plasmid stabilization protein, at 58,370 to 60,397
GFF6615
GFF6616 - UPF0380 proteins YafZ and homologs, at 60,476 to 61,300
GFF6616
GFF6617 - no description, at 61,882 to 62,058
GFF6617
GFF6618 - Mlr6156 protein, at 62,138 to 62,494
GFF6618
Position (kb) 60
61
62 Strain fitness (log2 ratio) -1
0
1
2 at 59.622 kb on + strand, within GFF6615 at 59.622 kb on + strand, within GFF6615 at 59.622 kb on + strand, within GFF6615 at 59.622 kb on + strand, within GFF6615 at 59.623 kb on - strand, within GFF6615 at 59.793 kb on + strand, within GFF6615 at 59.793 kb on + strand, within GFF6615 at 59.794 kb on - strand, within GFF6615 at 59.987 kb on + strand, within GFF6615 at 59.988 kb on - strand, within GFF6615 at 60.178 kb on - strand, within GFF6615 at 60.547 kb on + strand at 60.937 kb on + strand, within GFF6616 at 60.937 kb on + strand, within GFF6616 at 60.938 kb on - strand, within GFF6616 at 60.967 kb on - strand, within GFF6616 at 61.053 kb on - strand, within GFF6616 at 61.164 kb on + strand, within GFF6616 at 61.164 kb on + strand, within GFF6616 at 61.164 kb on + strand, within GFF6616 at 61.164 kb on + strand, within GFF6616 at 61.164 kb on + strand, within GFF6616 at 61.164 kb on + strand, within GFF6616 at 61.164 kb on + strand, within GFF6616 at 61.165 kb on - strand, within GFF6616 at 61.165 kb on - strand, within GFF6616 at 61.165 kb on - strand, within GFF6616 at 61.165 kb on - strand, within GFF6616 at 61.165 kb on - strand, within GFF6616 at 61.165 kb on - strand, within GFF6616 at 61.170 kb on + strand, within GFF6616 at 61.349 kb on - strand at 61.803 kb on - strand at 61.883 kb on + strand at 61.883 kb on + strand at 61.883 kb on + strand at 61.884 kb on - strand at 62.178 kb on + strand, within GFF6618 at 62.208 kb on + strand, within GFF6618 at 62.209 kb on - strand, within GFF6618 at 62.209 kb on - strand, within GFF6618
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL remove 59,622 + GFF6615 0.62 -0.4 59,622 + GFF6615 0.62 -0.1 59,622 + GFF6615 0.62 -0.7 59,622 + GFF6615 0.62 +0.1 59,623 - GFF6615 0.62 -0.0 59,793 + GFF6615 0.70 -1.4 59,793 + GFF6615 0.70 -0.7 59,794 - GFF6615 0.70 +0.3 59,987 + GFF6615 0.80 -0.2 59,988 - GFF6615 0.80 -0.0 60,178 - GFF6615 0.89 -0.5 60,547 + -0.6 60,937 + GFF6616 0.56 +0.4 60,937 + GFF6616 0.56 +0.7 60,938 - GFF6616 0.56 +0.9 60,967 - GFF6616 0.60 +0.4 61,053 - GFF6616 0.70 -0.2 61,164 + GFF6616 0.83 -0.5 61,164 + GFF6616 0.83 +1.3 61,164 + GFF6616 0.83 +0.2 61,164 + GFF6616 0.83 +0.4 61,164 + GFF6616 0.83 -1.7 61,164 + GFF6616 0.83 +1.9 61,164 + GFF6616 0.83 +0.9 61,165 - GFF6616 0.84 -0.5 61,165 - GFF6616 0.84 -0.9 61,165 - GFF6616 0.84 -0.7 61,165 - GFF6616 0.84 -0.4 61,165 - GFF6616 0.84 +0.7 61,165 - GFF6616 0.84 +0.5 61,170 + GFF6616 0.84 -0.0 61,349 - -0.0 61,803 - -0.3 61,883 + -1.3 61,883 + +0.5 61,883 + +0.7 61,884 - +0.1 62,178 + GFF6618 0.11 -1.7 62,208 + GFF6618 0.20 +0.3 62,209 - GFF6618 0.20 +0.6 62,209 - GFF6618 0.20 -0.3
Or see this region's nucleotide sequence