Experiment: M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF5692 and GFF5693 are separated by 161 nucleotides GFF5693 and GFF5694 are separated by 63 nucleotides GFF5694 and GFF5695 are separated by 57 nucleotides
GFF5692 - Glutamate/aspartate ABC transporter, permease protein GltJ (TC 3.A.1.3.4), at 66,927 to 67,622
GFF5692
GFF5693 - ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines), at 67,784 to 68,611
GFF5693
GFF5694 - no description, at 68,675 to 68,824
GFF5694
GFF5695 - Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9), FabV => refractory to triclosan, at 68,882 to 70,078
GFF5695
Position (kb) 67
68
69 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 66.958 kb on + strand at 66.958 kb on + strand at 66.958 kb on + strand at 66.959 kb on - strand at 66.959 kb on - strand at 67.000 kb on + strand, within GFF5692 at 67.000 kb on + strand, within GFF5692 at 67.000 kb on + strand, within GFF5692 at 67.001 kb on - strand, within GFF5692 at 67.001 kb on - strand, within GFF5692 at 67.001 kb on - strand, within GFF5692 at 67.001 kb on - strand, within GFF5692 at 67.069 kb on + strand, within GFF5692 at 67.069 kb on + strand, within GFF5692 at 67.069 kb on + strand, within GFF5692 at 67.070 kb on - strand, within GFF5692 at 67.070 kb on - strand, within GFF5692 at 67.070 kb on - strand, within GFF5692 at 67.070 kb on - strand, within GFF5692 at 67.070 kb on - strand, within GFF5692 at 67.070 kb on - strand, within GFF5692 at 67.179 kb on + strand, within GFF5692 at 67.202 kb on - strand, within GFF5692 at 67.295 kb on - strand, within GFF5692 at 67.342 kb on + strand, within GFF5692 at 67.343 kb on - strand, within GFF5692 at 67.343 kb on - strand, within GFF5692 at 67.343 kb on - strand, within GFF5692 at 67.343 kb on - strand, within GFF5692 at 67.441 kb on + strand, within GFF5692 at 67.441 kb on + strand, within GFF5692 at 67.442 kb on - strand, within GFF5692 at 67.582 kb on + strand at 67.582 kb on + strand at 67.582 kb on + strand at 67.583 kb on - strand at 67.583 kb on - strand at 67.606 kb on + strand at 67.607 kb on - strand at 67.635 kb on + strand at 67.635 kb on + strand at 67.635 kb on + strand at 67.636 kb on - strand at 67.636 kb on - strand at 67.636 kb on - strand at 67.636 kb on - strand at 67.653 kb on + strand at 67.653 kb on + strand at 67.654 kb on - strand at 67.851 kb on + strand at 67.852 kb on - strand at 67.995 kb on + strand, within GFF5693 at 67.995 kb on + strand, within GFF5693 at 67.995 kb on + strand, within GFF5693 at 67.995 kb on + strand, within GFF5693 at 67.996 kb on - strand, within GFF5693 at 67.996 kb on - strand, within GFF5693 at 67.996 kb on - strand, within GFF5693 at 67.996 kb on - strand, within GFF5693 at 67.996 kb on - strand, within GFF5693 at 67.996 kb on - strand, within GFF5693 at 68.026 kb on - strand, within GFF5693 at 68.058 kb on + strand, within GFF5693 at 68.058 kb on + strand, within GFF5693 at 68.058 kb on + strand, within GFF5693 at 68.059 kb on - strand, within GFF5693 at 68.646 kb on + strand at 68.653 kb on - strand at 68.653 kb on - strand at 68.668 kb on + strand at 68.683 kb on + strand at 68.685 kb on + strand at 68.685 kb on + strand at 68.685 kb on + strand at 68.685 kb on + strand at 68.685 kb on + strand at 68.686 kb on - strand at 68.686 kb on - strand at 68.686 kb on - strand at 68.686 kb on - strand at 68.705 kb on + strand, within GFF5694 at 68.860 kb on + strand at 68.860 kb on + strand at 68.860 kb on + strand at 68.860 kb on + strand at 68.861 kb on - strand at 68.861 kb on - strand at 68.969 kb on + strand at 68.969 kb on + strand at 68.969 kb on + strand at 68.969 kb on + strand at 68.970 kb on - strand at 68.970 kb on - strand at 68.970 kb on - strand at 69.146 kb on + strand, within GFF5695 at 69.146 kb on + strand, within GFF5695 at 69.147 kb on - strand, within GFF5695 at 69.147 kb on - strand, within GFF5695 at 69.147 kb on - strand, within GFF5695 at 69.147 kb on - strand, within GFF5695 at 69.147 kb on - strand, within GFF5695 at 69.191 kb on + strand, within GFF5695 at 69.192 kb on - strand, within GFF5695 at 69.290 kb on + strand, within GFF5695 at 69.290 kb on + strand, within GFF5695 at 69.290 kb on + strand, within GFF5695 at 69.291 kb on - strand, within GFF5695 at 69.291 kb on - strand, within GFF5695 at 69.403 kb on + strand, within GFF5695 at 69.554 kb on + strand, within GFF5695 at 69.554 kb on + strand, within GFF5695 at 69.554 kb on + strand, within GFF5695 at 69.554 kb on + strand, within GFF5695 at 69.554 kb on + strand, within GFF5695 at 69.554 kb on + strand, within GFF5695 at 69.555 kb on - strand, within GFF5695 at 69.555 kb on - strand, within GFF5695 at 69.584 kb on + strand, within GFF5695 at 69.584 kb on + strand, within GFF5695 at 69.584 kb on + strand, within GFF5695 at 69.585 kb on - strand, within GFF5695 at 69.585 kb on - strand, within GFF5695
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL remove 66,958 + -0.3 66,958 + -0.5 66,958 + -0.8 66,959 - -1.4 66,959 - -0.4 67,000 + GFF5692 0.10 +0.7 67,000 + GFF5692 0.10 -1.9 67,000 + GFF5692 0.10 -0.2 67,001 - GFF5692 0.11 -1.0 67,001 - GFF5692 0.11 -0.3 67,001 - GFF5692 0.11 +0.2 67,001 - GFF5692 0.11 -0.3 67,069 + GFF5692 0.20 +0.1 67,069 + GFF5692 0.20 +0.1 67,069 + GFF5692 0.20 -0.1 67,070 - GFF5692 0.21 +0.4 67,070 - GFF5692 0.21 -0.9 67,070 - GFF5692 0.21 +0.1 67,070 - GFF5692 0.21 +0.4 67,070 - GFF5692 0.21 -0.2 67,070 - GFF5692 0.21 +3.1 67,179 + GFF5692 0.36 +0.1 67,202 - GFF5692 0.40 +0.3 67,295 - GFF5692 0.53 -0.5 67,342 + GFF5692 0.60 -0.5 67,343 - GFF5692 0.60 -1.1 67,343 - GFF5692 0.60 -1.5 67,343 - GFF5692 0.60 +0.0 67,343 - GFF5692 0.60 +0.1 67,441 + GFF5692 0.74 +0.1 67,441 + GFF5692 0.74 +0.3 67,442 - GFF5692 0.74 -0.4 67,582 + +0.6 67,582 + +0.2 67,582 + +0.1 67,583 - +0.5 67,583 - +0.6 67,606 + +0.2 67,607 - +0.5 67,635 + -0.3 67,635 + -0.0 67,635 + -0.0 67,636 - -1.0 67,636 - -2.2 67,636 - -0.6 67,636 - -0.5 67,653 + -0.5 67,653 + -0.2 67,654 - +0.8 67,851 + -0.2 67,852 - -0.4 67,995 + GFF5693 0.25 -0.3 67,995 + GFF5693 0.25 +0.9 67,995 + GFF5693 0.25 +0.8 67,995 + GFF5693 0.25 -1.9 67,996 - GFF5693 0.26 +0.1 67,996 - GFF5693 0.26 -0.6 67,996 - GFF5693 0.26 +1.6 67,996 - GFF5693 0.26 -0.5 67,996 - GFF5693 0.26 -1.2 67,996 - GFF5693 0.26 -0.9 68,026 - GFF5693 0.29 +0.1 68,058 + GFF5693 0.33 -0.3 68,058 + GFF5693 0.33 +1.2 68,058 + GFF5693 0.33 +0.8 68,059 - GFF5693 0.33 +0.2 68,646 + -0.5 68,653 - -0.3 68,653 - +0.3 68,668 + +0.2 68,683 + +0.1 68,685 + -1.0 68,685 + +0.1 68,685 + +1.2 68,685 + -0.5 68,685 + +0.5 68,686 - +0.4 68,686 - +0.2 68,686 - -0.2 68,686 - +0.5 68,705 + GFF5694 0.20 -0.3 68,860 + +0.4 68,860 + -1.0 68,860 + +0.1 68,860 + -1.6 68,861 - -0.4 68,861 - -0.9 68,969 + -0.5 68,969 + +0.4 68,969 + -0.1 68,969 + -1.0 68,970 - -0.8 68,970 - -0.6 68,970 - +0.9 69,146 + GFF5695 0.22 +0.0 69,146 + GFF5695 0.22 -0.4 69,147 - GFF5695 0.22 +1.0 69,147 - GFF5695 0.22 +0.1 69,147 - GFF5695 0.22 +0.1 69,147 - GFF5695 0.22 -0.0 69,147 - GFF5695 0.22 -0.8 69,191 + GFF5695 0.26 -1.6 69,192 - GFF5695 0.26 -1.5 69,290 + GFF5695 0.34 +0.8 69,290 + GFF5695 0.34 -0.8 69,290 + GFF5695 0.34 +0.4 69,291 - GFF5695 0.34 -0.5 69,291 - GFF5695 0.34 -0.3 69,403 + GFF5695 0.44 +0.1 69,554 + GFF5695 0.56 -1.4 69,554 + GFF5695 0.56 +1.1 69,554 + GFF5695 0.56 -0.2 69,554 + GFF5695 0.56 -0.8 69,554 + GFF5695 0.56 -0.1 69,554 + GFF5695 0.56 -1.9 69,555 - GFF5695 0.56 -0.9 69,555 - GFF5695 0.56 +0.8 69,584 + GFF5695 0.59 +0.6 69,584 + GFF5695 0.59 +0.4 69,584 + GFF5695 0.59 -0.2 69,585 - GFF5695 0.59 +0.2 69,585 - GFF5695 0.59 -0.2
Or see this region's nucleotide sequence