Strain Fitness in Variovorax sp. SCN45 around GFF4287

Experiment: M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
206,364	+				-0.7
206,737	+		GFF4286	0.46	-0.2
206,833	+		GFF4286	0.56	+0.2
207,407	+		GFF4287	0.11	+0.1
207,407	+		GFF4287	0.11	-1.0
207,425	+		GFF4287	0.13	+2.1
207,426	-		GFF4287	0.13	+0.6
207,437	+		GFF4287	0.14	-0.8
207,438	-		GFF4287	0.14	+0.8
207,438	-		GFF4287	0.14	+0.4
208,175	+		GFF4287	0.76	+0.8
208,286	+		GFF4287	0.85	+0.1
208,502	+				-0.2
208,614	-				-0.3
208,614	-				-0.4
208,736	+		GFF4288	0.20	-0.2
208,810	+		GFF4288	0.27	-0.5
208,811	-		GFF4288	0.27	-0.3
208,952	+		GFF4288	0.39	-0.5
208,952	+		GFF4288	0.39	-0.8
209,096	+		GFF4288	0.51	+0.2
209,097	-		GFF4288	0.51	+2.6