Strain Fitness in Variovorax sp. SCN45 around GFF4193

Experiment: M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
106,980	+				+0.1
107,688	+		GFF4192	0.84	-0.6
107,761	-				-0.1
107,797	-				-0.8
107,885	-				+0.1
108,271	+		GFF4193	0.38	-1.5
108,272	-		GFF4193	0.38	-0.6
108,272	-		GFF4193	0.38	-1.5
108,427	+		GFF4193	0.51	-0.6
108,428	-		GFF4193	0.51	-0.2
108,796	+		GFF4193	0.83	-0.9
108,919	+				-1.0
109,030	+				-0.5
109,218	+		GFF4194	0.15	+0.4
109,218	+		GFF4194	0.15	+0.8
109,218	+		GFF4194	0.15	-0.3
109,219	-		GFF4194	0.15	+0.2
109,346	-		GFF4194	0.26	+0.2
109,375	+		GFF4194	0.28	+0.2
109,411	+		GFF4194	0.31	-1.0
109,412	-		GFF4194	0.31	-0.7
109,574	-		GFF4194	0.44	+0.4
109,678	+		GFF4194	0.53	+0.4