Strain Fitness in Variovorax sp. SCN45 around GFF1937

Experiment: M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
629,561	-				-0.4
629,561	-				-0.5
629,779	+		GFF1936	0.26	-0.2
629,780	-		GFF1936	0.26	-0.6
629,780	-		GFF1936	0.26	-0.2
629,780	-		GFF1936	0.26	-0.1
629,780	-		GFF1936	0.26	+0.9
629,933	-		GFF1936	0.44	-0.6
630,395	-				-0.4
630,806	+		GFF1937	0.29	+0.1
631,297	-		GFF1937	0.66	+0.4
631,574	+		GFF1937	0.87	+2.3
631,575	-		GFF1937	0.87	+1.4
631,575	-		GFF1937	0.87	-1.5
631,577	-		GFF1937	0.87	-0.2
631,577	-		GFF1937	0.87	+0.3
631,836	+				+0.1
631,837	-				+0.6
631,837	-				+0.1
631,837	-				-1.2