Strain Fitness in Variovorax sp. SCN45 around GFF1559

Experiment: M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
160,337	+		GFF1558	0.85	+0.1
160,337	+		GFF1558	0.85	+0.3
160,338	-		GFF1558	0.85	-0.7
160,338	-		GFF1558	0.85	-0.7
161,277	+		GFF1559	0.39	+0.6
161,349	+		GFF1559	0.49	+0.9
161,775	+				+0.4
161,775	+				-0.0
161,776	-				+0.4
161,814	+				-0.4
161,815	-				+0.2
161,855	+				+0.5
161,856	-				-0.8
161,884	+				+0.7
161,885	-				+0.4
161,885	-				+0.3
162,213	+		GFF1560	0.66	-0.7
162,463	-				-0.5
162,639	+		GFF1561	0.16	-0.3
162,685	-		GFF1561	0.19	-1.1