Experiment: M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1551 and GFF1552 are separated by 1 nucleotides GFF1552 and GFF1553 are separated by 93 nucleotides GFF1553 and GFF1554 are separated by 123 nucleotides
GFF1551 - hypothetical protein, at 149,829 to 151,268
GFF1551
GFF1552 - Phosphate regulon transcriptional regulatory protein PhoB (SphR), at 151,270 to 152,079
GFF1552
GFF1553 - no description, at 152,173 to 152,718
GFF1553
GFF1554 - no description, at 152,842 to 153,189
GFF1554
Position (kb) 151
152
153 Strain fitness (log2 ratio) -2
-1
0
1
2 at 150.298 kb on + strand, within GFF1551 at 150.298 kb on + strand, within GFF1551 at 150.299 kb on - strand, within GFF1551 at 150.299 kb on - strand, within GFF1551 at 150.299 kb on - strand, within GFF1551 at 150.299 kb on - strand, within GFF1551 at 150.661 kb on + strand, within GFF1551 at 150.661 kb on + strand, within GFF1551 at 150.661 kb on + strand, within GFF1551 at 150.662 kb on - strand, within GFF1551 at 150.662 kb on - strand, within GFF1551 at 150.662 kb on - strand, within GFF1551 at 150.662 kb on - strand, within GFF1551 at 150.676 kb on + strand, within GFF1551 at 150.677 kb on - strand, within GFF1551 at 150.765 kb on + strand, within GFF1551 at 150.766 kb on - strand, within GFF1551 at 151.169 kb on + strand at 151.170 kb on - strand at 151.304 kb on + strand at 151.305 kb on - strand at 151.691 kb on + strand, within GFF1552 at 151.691 kb on + strand, within GFF1552 at 151.692 kb on - strand, within GFF1552 at 151.692 kb on - strand, within GFF1552 at 151.907 kb on + strand, within GFF1552 at 151.926 kb on - strand, within GFF1552 at 152.117 kb on + strand at 152.118 kb on - strand at 152.281 kb on + strand, within GFF1553 at 152.359 kb on + strand, within GFF1553 at 152.360 kb on - strand, within GFF1553 at 152.395 kb on + strand, within GFF1553 at 152.395 kb on + strand, within GFF1553 at 152.395 kb on + strand, within GFF1553 at 152.395 kb on + strand, within GFF1553 at 152.396 kb on - strand, within GFF1553 at 152.396 kb on - strand, within GFF1553 at 152.396 kb on - strand, within GFF1553 at 152.396 kb on - strand, within GFF1553 at 152.548 kb on + strand, within GFF1553 at 152.548 kb on + strand, within GFF1553 at 152.548 kb on + strand, within GFF1553 at 152.549 kb on - strand, within GFF1553 at 152.672 kb on - strand at 152.679 kb on + strand at 152.689 kb on - strand at 152.697 kb on + strand at 152.697 kb on + strand at 152.698 kb on - strand at 152.698 kb on - strand at 152.733 kb on + strand at 152.734 kb on - strand at 152.734 kb on - strand at 153.032 kb on + strand, within GFF1554
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL remove 150,298 + GFF1551 0.33 -0.3 150,298 + GFF1551 0.33 +0.0 150,299 - GFF1551 0.33 +0.3 150,299 - GFF1551 0.33 -1.3 150,299 - GFF1551 0.33 -0.2 150,299 - GFF1551 0.33 -1.3 150,661 + GFF1551 0.58 +0.8 150,661 + GFF1551 0.58 -0.8 150,661 + GFF1551 0.58 +0.3 150,662 - GFF1551 0.58 +0.3 150,662 - GFF1551 0.58 -0.1 150,662 - GFF1551 0.58 -0.6 150,662 - GFF1551 0.58 +0.9 150,676 + GFF1551 0.59 -0.7 150,677 - GFF1551 0.59 -0.2 150,765 + GFF1551 0.65 +1.8 150,766 - GFF1551 0.65 +0.2 151,169 + +0.4 151,170 - -0.7 151,304 + +1.0 151,305 - -1.6 151,691 + GFF1552 0.52 +1.8 151,691 + GFF1552 0.52 +0.9 151,692 - GFF1552 0.52 -0.0 151,692 - GFF1552 0.52 +0.4 151,907 + GFF1552 0.79 +0.5 151,926 - GFF1552 0.81 -0.7 152,117 + +0.3 152,118 - -1.0 152,281 + GFF1553 0.20 -0.9 152,359 + GFF1553 0.34 -0.1 152,360 - GFF1553 0.34 +0.3 152,395 + GFF1553 0.41 +1.8 152,395 + GFF1553 0.41 -1.3 152,395 + GFF1553 0.41 -0.5 152,395 + GFF1553 0.41 +0.8 152,396 - GFF1553 0.41 -0.2 152,396 - GFF1553 0.41 -1.5 152,396 - GFF1553 0.41 -0.2 152,396 - GFF1553 0.41 +0.5 152,548 + GFF1553 0.69 +1.5 152,548 + GFF1553 0.69 -0.5 152,548 + GFF1553 0.69 -0.2 152,549 - GFF1553 0.69 +0.5 152,672 - +0.1 152,679 + -1.2 152,689 - -1.3 152,697 + -0.0 152,697 + -2.2 152,698 - -1.3 152,698 - +1.3 152,733 + +0.7 152,734 - -1.3 152,734 - -0.7 153,032 + GFF1554 0.55 -1.0
Or see this region's nucleotide sequence