Experiment: M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF882 and GFF883 are separated by 144 nucleotides GFF883 and GFF884 are separated by 31 nucleotides
GFF882 - Outer membrane porin, at 191,053 to 192,117
GFF882
GFF883 - 2-pyrone-4,6-dicarboxylic acid hydrolase (EC 3.1.1.57), at 192,262 to 193,137
GFF883
GFF884 - BUG/TctC family periplasmic protein, at 193,169 to 194,146
GFF884
Position (kb) 192
193
194 Strain fitness (log2 ratio) -1
0
1
2 at 191.336 kb on + strand, within GFF882 at 191.528 kb on + strand, within GFF882 at 191.529 kb on - strand, within GFF882 at 191.570 kb on + strand, within GFF882 at 191.570 kb on + strand, within GFF882 at 191.570 kb on + strand, within GFF882 at 191.571 kb on - strand, within GFF882 at 191.571 kb on - strand, within GFF882 at 191.618 kb on + strand, within GFF882 at 191.618 kb on + strand, within GFF882 at 191.777 kb on + strand, within GFF882 at 191.777 kb on + strand, within GFF882 at 191.778 kb on - strand, within GFF882 at 191.892 kb on - strand, within GFF882 at 191.984 kb on + strand, within GFF882 at 192.146 kb on - strand at 192.146 kb on - strand at 192.233 kb on + strand at 192.275 kb on + strand at 192.275 kb on + strand at 192.467 kb on + strand, within GFF883 at 192.467 kb on + strand, within GFF883 at 192.468 kb on - strand, within GFF883 at 192.468 kb on - strand, within GFF883 at 192.468 kb on - strand, within GFF883 at 192.468 kb on - strand, within GFF883 at 192.656 kb on + strand, within GFF883 at 192.657 kb on - strand, within GFF883 at 192.657 kb on - strand, within GFF883 at 193.008 kb on - strand, within GFF883 at 193.526 kb on + strand, within GFF884 at 193.707 kb on + strand, within GFF884 at 193.707 kb on + strand, within GFF884 at 193.708 kb on - strand, within GFF884 at 193.708 kb on - strand, within GFF884 at 193.708 kb on - strand, within GFF884 at 193.816 kb on - strand, within GFF884
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL remove 191,336 + GFF882 0.27 -0.9 191,528 + GFF882 0.45 -0.6 191,529 - GFF882 0.45 -0.7 191,570 + GFF882 0.49 +0.3 191,570 + GFF882 0.49 -1.1 191,570 + GFF882 0.49 +0.3 191,571 - GFF882 0.49 +0.7 191,571 - GFF882 0.49 +0.5 191,618 + GFF882 0.53 +0.6 191,618 + GFF882 0.53 +0.3 191,777 + GFF882 0.68 +0.4 191,777 + GFF882 0.68 -1.3 191,778 - GFF882 0.68 -0.1 191,892 - GFF882 0.79 -0.1 191,984 + GFF882 0.87 +1.9 192,146 - -0.8 192,146 - +0.2 192,233 + +1.9 192,275 + +1.5 192,275 + -1.1 192,467 + GFF883 0.23 -1.1 192,467 + GFF883 0.23 -0.1 192,468 - GFF883 0.24 -0.5 192,468 - GFF883 0.24 -1.4 192,468 - GFF883 0.24 -0.2 192,468 - GFF883 0.24 +1.8 192,656 + GFF883 0.45 +0.0 192,657 - GFF883 0.45 -0.8 192,657 - GFF883 0.45 -1.2 193,008 - GFF883 0.85 -1.5 193,526 + GFF884 0.37 +0.2 193,707 + GFF884 0.55 +0.9 193,707 + GFF884 0.55 -0.8 193,708 - GFF884 0.55 -0.9 193,708 - GFF884 0.55 -0.6 193,708 - GFF884 0.55 -0.3 193,816 - GFF884 0.66 -0.1
Or see this region's nucleotide sequence