Experiment: M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF5530 and GFF5531 are separated by 107 nucleotides GFF5531 and GFF5532 are separated by 69 nucleotides GFF5532 and GFF5533 are separated by 113 nucleotides
GFF5530 - FIG00931903: hypothetical protein, at 159,618 to 160,655
GFF5530
GFF5531 - hypothetical protein, at 160,763 to 161,158
GFF5531
GFF5532 - Putative oxidoreductase, at 161,228 to 162,010
GFF5532
GFF5533 - hypothetical protein, at 162,124 to 162,501
GFF5533
Position (kb) 160
161
162 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 159.856 kb on + strand, within GFF5530 at 159.856 kb on + strand, within GFF5530 at 159.856 kb on + strand, within GFF5530 at 159.856 kb on + strand, within GFF5530 at 159.856 kb on + strand, within GFF5530 at 159.856 kb on + strand, within GFF5530 at 159.857 kb on - strand, within GFF5530 at 159.857 kb on - strand, within GFF5530 at 159.857 kb on - strand, within GFF5530 at 159.857 kb on - strand, within GFF5530 at 159.857 kb on - strand, within GFF5530 at 160.137 kb on + strand, within GFF5530 at 160.239 kb on + strand, within GFF5530 at 160.239 kb on + strand, within GFF5530 at 160.239 kb on + strand, within GFF5530 at 160.239 kb on + strand, within GFF5530 at 160.239 kb on + strand, within GFF5530 at 160.240 kb on - strand, within GFF5530 at 160.240 kb on - strand, within GFF5530 at 160.240 kb on - strand, within GFF5530 at 160.240 kb on - strand, within GFF5530 at 160.240 kb on - strand, within GFF5530 at 160.305 kb on + strand, within GFF5530 at 160.305 kb on + strand, within GFF5530 at 160.305 kb on + strand, within GFF5530 at 160.306 kb on - strand, within GFF5530 at 160.306 kb on - strand, within GFF5530 at 160.306 kb on - strand, within GFF5530 at 160.317 kb on + strand, within GFF5530 at 160.317 kb on + strand, within GFF5530 at 160.318 kb on - strand, within GFF5530 at 160.318 kb on - strand, within GFF5530 at 160.326 kb on + strand, within GFF5530 at 160.326 kb on + strand, within GFF5530 at 160.326 kb on + strand, within GFF5530 at 160.326 kb on + strand, within GFF5530 at 160.326 kb on + strand, within GFF5530 at 160.327 kb on - strand, within GFF5530 at 160.327 kb on - strand, within GFF5530 at 160.335 kb on + strand, within GFF5530 at 160.335 kb on + strand, within GFF5530 at 160.335 kb on + strand, within GFF5530 at 160.335 kb on + strand, within GFF5530 at 160.336 kb on - strand, within GFF5530 at 160.336 kb on - strand, within GFF5530 at 160.336 kb on - strand, within GFF5530 at 160.336 kb on - strand, within GFF5530 at 160.336 kb on - strand, within GFF5530 at 160.336 kb on - strand, within GFF5530 at 160.336 kb on - strand, within GFF5530 at 160.336 kb on - strand, within GFF5530 at 160.336 kb on - strand, within GFF5530 at 160.336 kb on - strand, within GFF5530 at 160.375 kb on - strand, within GFF5530 at 160.375 kb on - strand, within GFF5530 at 160.398 kb on + strand, within GFF5530 at 160.398 kb on + strand, within GFF5530 at 160.461 kb on + strand, within GFF5530 at 160.461 kb on + strand, within GFF5530 at 160.461 kb on + strand, within GFF5530 at 160.461 kb on + strand, within GFF5530 at 160.462 kb on - strand, within GFF5530 at 160.462 kb on - strand, within GFF5530 at 160.462 kb on - strand, within GFF5530 at 160.653 kb on + strand at 160.653 kb on + strand at 160.653 kb on + strand at 160.653 kb on + strand at 160.654 kb on - strand at 160.700 kb on + strand at 160.700 kb on + strand at 160.701 kb on - strand at 160.701 kb on - strand at 160.701 kb on - strand at 160.725 kb on + strand at 160.725 kb on + strand at 160.725 kb on + strand at 160.725 kb on + strand at 160.725 kb on + strand at 160.725 kb on + strand at 160.725 kb on + strand at 160.725 kb on + strand at 160.725 kb on + strand at 160.725 kb on + strand at 160.725 kb on + strand at 160.725 kb on + strand at 160.725 kb on + strand at 160.726 kb on - strand at 160.726 kb on - strand at 160.726 kb on - strand at 160.726 kb on - strand at 160.726 kb on - strand at 160.726 kb on - strand at 160.757 kb on + strand at 160.757 kb on + strand at 160.757 kb on + strand at 160.757 kb on + strand at 160.757 kb on + strand at 160.757 kb on + strand at 160.757 kb on + strand at 160.758 kb on - strand at 160.758 kb on - strand at 160.758 kb on - strand at 160.758 kb on - strand at 160.758 kb on - strand at 160.758 kb on - strand at 160.758 kb on - strand at 161.048 kb on + strand, within GFF5531 at 161.049 kb on - strand, within GFF5531 at 161.049 kb on - strand, within GFF5531 at 161.253 kb on + strand at 161.253 kb on + strand at 161.253 kb on + strand at 161.253 kb on + strand at 161.253 kb on + strand at 161.253 kb on + strand at 161.253 kb on + strand at 161.253 kb on + strand at 161.253 kb on + strand at 161.253 kb on + strand at 161.253 kb on + strand at 161.254 kb on - strand at 161.254 kb on - strand at 161.254 kb on - strand at 161.254 kb on - strand at 161.254 kb on - strand at 161.254 kb on - strand at 161.254 kb on - strand at 161.431 kb on - strand, within GFF5532 at 161.511 kb on + strand, within GFF5532 at 161.511 kb on + strand, within GFF5532 at 161.511 kb on + strand, within GFF5532 at 161.512 kb on - strand, within GFF5532 at 161.512 kb on - strand, within GFF5532 at 161.512 kb on - strand, within GFF5532 at 161.512 kb on - strand, within GFF5532 at 161.512 kb on - strand, within GFF5532 at 161.520 kb on + strand, within GFF5532 at 161.970 kb on + strand at 161.982 kb on + strand at 161.982 kb on + strand at 161.982 kb on + strand at 161.982 kb on + strand at 161.983 kb on - strand at 161.983 kb on - strand at 162.049 kb on + strand at 162.049 kb on + strand at 162.072 kb on + strand at 162.072 kb on + strand at 162.072 kb on + strand at 162.072 kb on + strand at 162.072 kb on + strand at 162.073 kb on - strand at 162.073 kb on - strand at 162.073 kb on - strand at 162.073 kb on - strand at 162.073 kb on - strand at 162.111 kb on + strand at 162.111 kb on + strand at 162.111 kb on + strand at 162.112 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL remove 159,856 + GFF5530 0.23 -0.9 159,856 + GFF5530 0.23 -0.3 159,856 + GFF5530 0.23 -0.7 159,856 + GFF5530 0.23 +0.0 159,856 + GFF5530 0.23 -0.1 159,856 + GFF5530 0.23 +0.4 159,857 - GFF5530 0.23 -0.7 159,857 - GFF5530 0.23 +1.1 159,857 - GFF5530 0.23 -0.5 159,857 - GFF5530 0.23 -1.3 159,857 - GFF5530 0.23 +2.4 160,137 + GFF5530 0.50 -0.6 160,239 + GFF5530 0.60 -0.2 160,239 + GFF5530 0.60 -1.2 160,239 + GFF5530 0.60 +0.9 160,239 + GFF5530 0.60 -1.1 160,239 + GFF5530 0.60 -0.8 160,240 - GFF5530 0.60 +1.4 160,240 - GFF5530 0.60 -1.0 160,240 - GFF5530 0.60 +1.9 160,240 - GFF5530 0.60 +1.0 160,240 - GFF5530 0.60 -0.9 160,305 + GFF5530 0.66 +0.1 160,305 + GFF5530 0.66 -1.5 160,305 + GFF5530 0.66 -0.5 160,306 - GFF5530 0.66 +0.7 160,306 - GFF5530 0.66 -1.4 160,306 - GFF5530 0.66 -0.2 160,317 + GFF5530 0.67 +0.2 160,317 + GFF5530 0.67 +1.7 160,318 - GFF5530 0.67 +2.3 160,318 - GFF5530 0.67 -0.5 160,326 + GFF5530 0.68 -1.3 160,326 + GFF5530 0.68 -0.3 160,326 + GFF5530 0.68 -0.5 160,326 + GFF5530 0.68 -0.1 160,326 + GFF5530 0.68 +1.3 160,327 - GFF5530 0.68 -0.3 160,327 - GFF5530 0.68 -0.5 160,335 + GFF5530 0.69 +0.3 160,335 + GFF5530 0.69 -0.9 160,335 + GFF5530 0.69 +0.1 160,335 + GFF5530 0.69 -0.5 160,336 - GFF5530 0.69 -0.3 160,336 - GFF5530 0.69 +0.9 160,336 - GFF5530 0.69 +0.1 160,336 - GFF5530 0.69 -1.0 160,336 - GFF5530 0.69 +1.0 160,336 - GFF5530 0.69 -0.2 160,336 - GFF5530 0.69 +0.1 160,336 - GFF5530 0.69 +1.2 160,336 - GFF5530 0.69 -0.5 160,336 - GFF5530 0.69 -0.2 160,375 - GFF5530 0.73 +2.9 160,375 - GFF5530 0.73 -0.1 160,398 + GFF5530 0.75 -0.0 160,398 + GFF5530 0.75 +0.0 160,461 + GFF5530 0.81 -0.1 160,461 + GFF5530 0.81 -0.9 160,461 + GFF5530 0.81 -1.0 160,461 + GFF5530 0.81 +0.9 160,462 - GFF5530 0.81 -0.9 160,462 - GFF5530 0.81 +0.1 160,462 - GFF5530 0.81 -0.5 160,653 + +0.9 160,653 + +2.9 160,653 + +0.1 160,653 + -1.7 160,654 - -0.6 160,700 + +0.5 160,700 + +0.9 160,701 - +0.3 160,701 - -2.0 160,701 - +0.4 160,725 + -1.0 160,725 + -0.2 160,725 + +0.3 160,725 + +1.0 160,725 + -0.3 160,725 + +0.0 160,725 + -0.1 160,725 + +0.9 160,725 + +0.3 160,725 + -1.6 160,725 + -0.6 160,725 + +0.7 160,725 + -0.1 160,726 - +0.5 160,726 - -0.5 160,726 - -0.4 160,726 - +0.0 160,726 - -1.1 160,726 - +1.5 160,757 + +1.9 160,757 + -1.1 160,757 + -0.3 160,757 + -0.7 160,757 + -0.4 160,757 + -0.7 160,757 + +1.3 160,758 - -0.9 160,758 - -0.7 160,758 - -0.6 160,758 - -0.9 160,758 - +0.5 160,758 - -0.9 160,758 - +1.0 161,048 + GFF5531 0.72 -1.4 161,049 - GFF5531 0.72 -1.5 161,049 - GFF5531 0.72 -1.8 161,253 + +0.6 161,253 + -0.0 161,253 + -1.1 161,253 + +0.3 161,253 + +0.1 161,253 + -0.9 161,253 + +0.4 161,253 + -0.1 161,253 + +1.2 161,253 + -0.1 161,253 + +1.2 161,254 - -1.5 161,254 - -1.0 161,254 - +0.4 161,254 - +0.9 161,254 - -0.2 161,254 - -0.4 161,254 - -0.2 161,431 - GFF5532 0.26 -0.5 161,511 + GFF5532 0.36 +3.2 161,511 + GFF5532 0.36 -0.9 161,511 + GFF5532 0.36 -0.1 161,512 - GFF5532 0.36 +0.6 161,512 - GFF5532 0.36 +0.5 161,512 - GFF5532 0.36 +0.2 161,512 - GFF5532 0.36 -1.6 161,512 - GFF5532 0.36 -1.1 161,520 + GFF5532 0.37 -0.5 161,970 + +0.0 161,982 + -1.3 161,982 + -1.0 161,982 + -0.9 161,982 + -0.3 161,983 - +0.6 161,983 - -0.7 162,049 + -0.2 162,049 + +0.3 162,072 + -1.6 162,072 + -0.2 162,072 + +1.2 162,072 + -0.3 162,072 + +0.6 162,073 - -1.0 162,073 - -0.2 162,073 - -1.8 162,073 - -0.3 162,073 - +0.2 162,111 + +1.0 162,111 + -0.8 162,111 + +0.4 162,112 - +1.4
Or see this region's nucleotide sequence